Pairwise Alignments

Query, 446 a.a., SLC13 family permease from Methanococcus maripaludis S2

Subject, 574 a.a., TrkA domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  105 bits (261), Expect = 5e-27
 Identities = 51/186 (27%), Positives = 96/186 (51%), Gaps = 2/186 (1%)

Query: 263 FTFVVLMTATGTIPLVTAFMLGACMVVMTGCITMQEAFNSISWTTIFLFAGMLPLGSAMA 322
           F   ++++ TG +PL    +L        G +T+ E         + +    L L + M 
Sbjct: 389 FVITIVLSLTGVLPLAKGLVLLLLSYFAIGAVTLSELKRRFPLELVVIVGSALGLANLMM 448

Query: 323 ATGAATMIANTVITYV--HSPLALLAAAYILTALITEVMSNTATAALVMPLGIALADAFD 380
           +TG A  +A  ++  +  +         Y++T L+TE+++N A AAL  P+  A+A  + 
Sbjct: 449 STGLADGLAQGLLGTINGYGVFGAFVGVYLVTLLLTELVTNNAAAALAFPIAYAVALNYG 508

Query: 381 VSAKPILMAIAVAASSCFLTPIATPPNMIILGPGGYSFKDYAKSGWPLEILCAVVAIAVI 440
           V  +P +MA+   AS+ F++P     N+++   G Y F D+ + G PL +L +++ I ++
Sbjct: 509 VDPRPFIMAVVFGASASFISPYGYQTNLMVFNAGNYRFSDFLRLGLPLSVLYSLIVIFMV 568

Query: 441 PMIWPF 446
           P+I+PF
Sbjct: 569 PVIFPF 574



 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 12/180 (6%)

Query: 73  IDILSSSRAFADFGNKWVVLFMAAFILGEAVFRTGFADKIGQLTVKAAGKSQLKLMLLVM 132
           + ++S   A   F N  +V  +   +   A+ +T    K+ Q+     G + L + +  +
Sbjct: 39  LGMVSLDTALTSFTNTGLVTLVLLVLAATALEKTSLLGKLSQVI----GNNSLAVTMAKL 94

Query: 133 -LAIGTMSAFLSNTGTTAAFIPIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPN 191
             +   +S+F +NT   A+ I +V      A   P KLL+P+ YAA LGGTLTLIGT  N
Sbjct: 95  GFSTALLSSFTNNTAVVASLIGVVRRNQAHA---PAKLLLPLNYAAILGGTLTLIGTSTN 151

Query: 192 GLVNDALEKSGIAPFGFFEFAKIGILIFIVGILYYGTIGHKLLPESKAKAKDFVSDTLKY 251
            +VN  +E +G+   GFFEF  + +LI ++GI+    + +  LP+   + +D   +TL Y
Sbjct: 152 LIVNSFVENAGLPALGFFEFTPVAMLIVLLGIVLLIVLAN-TLPD---RREDSTEETLPY 207



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 19/205 (9%)

Query: 31  INSQKAIITLIILGTAAVLFFTEALPLPVTAMLVPVALSFPGIDILSSSRAFADFGNKWV 90
           ++S+++   L       VL  T  LPL     LV + LS+  I  ++ S     F  + V
Sbjct: 377 LDSRRSRFVLSSFVITIVLSLTGVLPL--AKGLVLLLLSYFAIGAVTLSELKRRFPLELV 434

Query: 91  VLFMAAFILGEAVFRTGFADKIGQ-LTVKAAGKSQLKLMLLVMLAIGTMSAFLSNTGTTA 149
           V+  +A  L   +  TG AD + Q L     G       + V L    ++  ++N    A
Sbjct: 435 VIVGSALGLANLMMSTGLADGLAQGLLGTINGYGVFGAFVGVYLVTLLLTELVTNNAAAA 494

Query: 150 AFIPIVMGICVSASLKPGKLLIPMAYAASLGGTLTLIGTPPNGLVNDALEKSGIAPFGFF 209
              PI   + ++  + P   ++ + + AS    ++  G   N +V +A        + F 
Sbjct: 495 LAFPIAYAVALNYGVDPRPFIMAVVFGAS-ASFISPYGYQTNLMVFNA------GNYRFS 547

Query: 210 EFAKIG---------ILIFIVGILY 225
           +F ++G         I+IF+V +++
Sbjct: 548 DFLRLGLPLSVLYSLIVIFMVPVIF 572