Pairwise Alignments

Query, 636 a.a., acetate--CoA ligase from Methanococcus maripaludis S2

Subject, 644 a.a., acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  429 bits (1104), Expect = e-124
 Identities = 233/631 (36%), Positives = 358/631 (56%), Gaps = 20/631 (3%)

Query: 16  LQQKALDDPEKFWGEQAKCLEWDKTWDKALDWNP-PYAKWFKGGSLNASYNCVDRHIKGN 74
           L+Q+A D+PE++W + A  ++W K     LD +  P  +W+  G +N  YN +DR +   
Sbjct: 18  LRQEARDNPEQYWRKAADMVDWHKAPSTILDSSQAPLYRWYTDGEINTCYNALDRQVDAG 77

Query: 75  RRNKAAI-----ICEKEDGSCGILTYYELYREVNKFANVLENLGVEKGDVVTIYMPMMTE 129
           R ++ A      + E E      ++Y E   +V + A +L+  GV KGD V IYMPM+ E
Sbjct: 78  RGSQTAFHYVSPVTETEYS----ISYTECLAQVKRLAGLLKAQGVNKGDRVVIYMPMVPE 133

Query: 130 AIIAMLACSRIGAIHNVVFSGFSSDALADRINDSKSKILVTTNLLYRRGKEIDLKKILDK 189
              AMLAC+RIGAIH+VVF GF+++ LA RIND+K  ++++ +        +  K +LD 
Sbjct: 134 TAYAMLACARIGAIHSVVFGGFAANELASRINDAKPVMVLSASCGVEPSGVVAYKPLLDA 193

Query: 190 ALLNCN-SIKHVVYAKRGIEEFNLVSGKEYFWDELMGGAKSYVEPVPVESEHPLFILYTS 248
           AL   +  +   +  +R   E  +  G++  W E +  A    + VPV++  PL++LYTS
Sbjct: 194 ALAQASHKVSKCLILQRPQYEAAMTPGRDLDWQESVASAAD-ADWVPVKATDPLYVLYTS 252

Query: 249 GTTGSPKGVVHSTGGYLTYATKTMDWTWGLNEMDVFWCTADIGWITGHTYVVYGPLSLGA 308
           GTTG PKGVV   GG+      +M + + +   D FW  +D+GW+ GH+Y+VYGPL  GA
Sbjct: 253 GTTGQPKGVVRDNGGHAVALAWSMRYLYDIEPGDTFWAASDVGWVVGHSYIVYGPLIAGA 312

Query: 309 TIVLYEG-AIDYPEPDRLWGIVENHGVTILYTAPTAIRMLMMYGEK--WVNTHDLSTLRL 365
           T VLYEG  +  P+    W  ++ +GV   +TAPTAIR +     +  +    +L  L+ 
Sbjct: 313 TSVLYEGKPVGTPDAGAFWRTIKKYGVKSFFTAPTAIRAIKREDPEGFFCRNTNLDCLKQ 372

Query: 366 LGSVGEPINPRAWKWYYKVIGKEKCPICDCYWQTETGGHIIYPPIGIQSVPLKPGSATFP 425
           +   GE  +P    W  +++GK   P+ D +WQTETG  +    +GI  +P+KPGS   P
Sbjct: 373 MFLAGERCDPDTLLWAQEMLGK---PVIDHWWQTETGWPVASNLMGIAQMPIKPGSPARP 429

Query: 426 GIGIDVDVVDNEGNPVDANVKGNLIIKRPW-PGMLAGLWNNDERYRAAYWDRFKNKFSTS 484
             G  VDVVD  GN V A   GN++I+ P  PG L  LW ND+RY  +Y   + + + T 
Sbjct: 430 VPGYQVDVVDEAGNSVGAGEYGNVVIRLPLPPGTLPTLWQNDKRYIDSYLSMYPDCYLTG 489

Query: 485 DYAIKDQDGYIWVLGRSDEVLNVSGHRIGTAELEHELVSNKMVAESAVVGKPDDVKGEVP 544
           D    D+DGY++++ R D+V+NV+GHR+ T   E  L  +  VAE+AV+G  D +KG+VP
Sbjct: 490 DAGYMDEDGYLYIMSRIDDVINVAGHRLSTGRFEEVLCQHPAVAEAAVIGVEDKLKGQVP 549

Query: 545 VAFVILNEKYRELPSNEVKAELIKHIRDTVGPIGTPAMIFFVNKLPKTRSGKIMRRILKK 604
           +  V+L     ++   ++  EL+  +R  +GP+    ++  + KLPKTRSGKI+R  ++K
Sbjct: 550 LGLVVLKNGV-DITDEQLNKELVALVRSEIGPVAAFKLVSAIPKLPKTRSGKILRATMRK 608

Query: 605 LIMGEEIGDVTTLEDNTSLEEVKKELEDFKY 635
           +   +E     T+ED  +LE V+  L    Y
Sbjct: 609 IADNQEYSVPATIEDPATLELVRNTLTRMGY 639