Pairwise Alignments

Query, 636 a.a., acetate--CoA ligase from Methanococcus maripaludis S2

Subject, 640 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  427 bits (1099), Expect = e-124
 Identities = 238/639 (37%), Positives = 367/639 (57%), Gaps = 20/639 (3%)

Query: 8   IMLEKYSELQQKALDDPEKFWGEQAKCLEWDKTWDKALDWNP-PYAKWFKGGSLNASYNC 66
           +M +   +L Q ++ + + FW + AK L+W     + LD +  P+  WF  G LN  YN 
Sbjct: 5   LMTDAGQQLHQTSIANKQAFWQQAAKALDWVTPSKQILDESEAPFYHWFSDGELNTCYNA 64

Query: 67  VDRHIKGNRRNKAAI-----ICEKEDGSCGILTYYELYREVNKFANVLENLGVEKGDVVT 121
           VDRH+   R  + AI     + E E      +TY EL  +V + A  L+++GV KGD V 
Sbjct: 65  VDRHVLAGRGEQIAIHYVSPVTETEYS----ITYRELQAQVARLAGYLQSVGVAKGDRVV 120

Query: 122 IYMPMMTEAIIAMLACSRIGAIHNVVFSGFSSDALADRINDSKSKILVTTNLLYRRGKEI 181
           IYMPM+ E   AMLAC+RIGAIH+VVF GF+++ LA RIND+K K++++ +        +
Sbjct: 121 IYMPMVPETAYAMLACARIGAIHSVVFGGFAANELATRINDAKPKLVMSASCGIEPSGVV 180

Query: 182 DLKKILDKALLNC-NSIKHVVYAKRGIEEFNLVSGKEYFWDELMGGAKSYVEPVPVESEH 240
             K +LDKAL    + ++H +   R   E  + +G++  W   +  + S  + V V++  
Sbjct: 181 PYKPLLDKALNEAVHKVEHCLILNRPQYEAQMQAGRDKDWQTALCTSDS-ADCVTVKATD 239

Query: 241 PLFILYTSGTTGSPKGVVHSTGGYLTYATKTMDWTWGLNEMDVFWCTADIGWITGHTYVV 300
           PL++LYTSGTTG PKGVV   GG+      +M   + + + DVFW  +D+GW+ GH+Y+V
Sbjct: 240 PLYVLYTSGTTGQPKGVVRDNGGHAVALAWSMANIYDIAQGDVFWAASDVGWVVGHSYIV 299

Query: 301 YGPLSLGATIVLYEG-AIDYPEPDRLWGIVENHGVTILYTAPTAIRMLMMYGE--KWVNT 357
           YGPL +GAT +LYEG  +  P+P   W  +  + V   +TAPTAIR +       +++  
Sbjct: 300 YGPLLVGATTLLYEGKPVGTPDPGAFWRTIAKYRVKSFFTAPTAIRAIKREDPDGEFILG 359

Query: 358 HDLSTLRLLGSVGEPINPRAWKWYYKVIGKEKCPICDCYWQTETGGHIIYPPIGIQSVPL 417
            DLS L+ +   GE  +P    W    + K   P+ D +WQTETG  +    +G+  + +
Sbjct: 360 VDLSCLKNVFLAGERCDPDTLHWAEAKLHK---PVIDHWWQTETGWPVAANLMGVAPIAV 416

Query: 418 KPGSATFPGIGIDVDVVDNEGNPVDANVKGNLIIKRPW-PGMLAGLWNNDERYRAAYWDR 476
           K GS   P  G +VDVVD  G  V ANV GN++IK P  PG L  LW N++RY+ +Y   
Sbjct: 417 KAGSPGRPVPGYEVDVVDELGAKVAANVSGNVVIKLPLPPGTLTTLWQNNKRYQDSYLSM 476

Query: 477 FKNKFSTSDYAIKDQDGYIWVLGRSDEVLNVSGHRIGTAELEHELVSNKMVAESAVVGKP 536
           +   + T D    D+DGY++++ R D+++NV+GHR+ T   E  L  +  VAE+AV+G  
Sbjct: 477 YPGYYLTGDAGYMDEDGYLYIMSRIDDIINVAGHRLSTGRFEEVLCQHPDVAEAAVIGVD 536

Query: 537 DDVKGEVPVAFVILNEKYRELPSNEVKAELIKHIRDTVGPIGTPAMIFFVNKLPKTRSGK 596
           D +KG+VP+  V+L +K   +   E+  +LI  +R  +GP+ +  ++  + KLPKTRSGK
Sbjct: 537 DKLKGQVPLGLVVL-KKGVTITDEELHKQLIALVRQEIGPVASFRLVSAIQKLPKTRSGK 595

Query: 597 IMRRILKKLIMGEEIGDVTTLEDNTSLEEVKKELEDFKY 635
           I+R  ++K+   ++     T+ED  +L+ V+  L    Y
Sbjct: 596 ILRGTMRKIADNQQYTAPATIEDPQTLDLVRTTLTRMGY 634