Pairwise Alignments

Query, 292 a.a., nitrogenase iron protein from Methanococcus maripaludis S2

Subject, 291 a.a., Nitrogenase iron protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  274 bits (701), Expect = 1e-78
 Identities = 136/272 (50%), Positives = 186/272 (68%), Gaps = 14/272 (5%)

Query: 2   KQIAFYGKGGIGKSTTVCNLAAALSKSGKKVIVVGCDPKHDCTSNLRSGEDIPTVLDVLR 61
           KQIA YGKGGIGKSTT  N++AAL+++G KV+  GCDPK D T+ LR G+ IP+VLD+LR
Sbjct: 6   KQIAIYGKGGIGKSTTTSNISAALAEAGYKVMQFGCDPKSDSTNTLRGGDYIPSVLDLLR 65

Query: 62  EKGIDKLGIETIIRENLLKKEDIIYEGFNGIYCVEAGGPKPGYGCAGRGVIVVIDLLKKM 121
           E                +   + I++GF GIYCVEAGGP PG GCAGRG+I  ++LLK+ 
Sbjct: 66  ENA-------------RVDAHEAIFQGFGGIYCVEAGGPAPGVGCAGRGIITAVELLKQQ 112

Query: 122 NVFEDLDVDVVLYDVLGDVVCGGFAMPLRMGLADQIYVVTSSDYMALYAANNICSGISQF 181
           NVFE+LD+D V++DVLGDVVCGGFA+P+R G+A+ ++ V+SSD+MA+YAANN+  GI ++
Sbjct: 113 NVFEELDLDYVIFDVLGDVVCGGFAVPIREGIAEHVFTVSSSDFMAIYAANNLFKGIQKY 172

Query: 182 VKRGGSTLGGIIYNVRGSMDAFDIVSEFANQLNANIIGKVPNSPIINEAEIDGQTAIEYA 241
              GG+ LGG+I N   +    DI+ +F  +    ++  VP S  + +AE+ G+T IE A
Sbjct: 173 SNAGGALLGGVIANSINTDFHRDIIDDFVARTQTQVVQYVPRSLTVTQAELQGRTTIEAA 232

Query: 242 PEEEISKIYMELAESIYQNNTGTMPNPLENAQ 273
           PE   ++IY  LA SI  +    +P PL NAQ
Sbjct: 233 PESAQAEIYRTLARSIADHTDSKVPTPL-NAQ 263