Pairwise Alignments

Query, 292 a.a., nitrogenase iron protein from Methanococcus maripaludis S2

Subject, 296 a.a., nitrogenase iron protein from Rhodopseudomonas palustris CGA009

 Score =  237 bits (604), Expect = 3e-67
 Identities = 129/277 (46%), Positives = 176/277 (63%), Gaps = 13/277 (4%)

Query: 2   KQIAFYGKGGIGKSTTVCNLAAALSKSGKKVIVVGCDPKHDCTSNLRSGEDIPTVLDVLR 61
           +QIAFYGKGGIGKSTT  N  AAL + G+K+++VGCDPK D T  + + +   TVL +  
Sbjct: 3   RQIAFYGKGGIGKSTTSQNTLAALVEMGQKILIVGCDPKADSTRLILNTKLQDTVLALAA 62

Query: 62  EKGIDKLGIETIIRENLLKKEDIIYEGFNGIYCVEAGGPKPGYGCAGRGVIVVIDLLKKM 121
           E G     +E       L+ ED++  G+ GI C EAGGP+PG GCAGRGVI  I+ L++ 
Sbjct: 63  EAG----SVED------LELEDVMKIGYKGIKCTEAGGPEPGVGCAGRGVITAINFLEEN 112

Query: 122 NVFEDLDVDVVLYDVLGDVVCGGFAMPLRMGLADQIYVVTSSDYMALYAANNICSGISQF 181
             +ED  VD V YDVLGDVVCGGFAMP+R   A +IY+V S + MALYAANNI  GI ++
Sbjct: 113 GAYED--VDYVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNISKGILKY 170

Query: 182 VKRGGSTLGGIIYNVRGSMDAFDIVSEFANQLNANIIGKVPNSPIINEAEIDGQTAIEYA 241
              GG  LGG+I N R +    D+    A +LN+ +I  VP   I+  AE+  +T I+YA
Sbjct: 171 ASSGGVRLGGLICNERQTDRELDLAEALAAKLNSKLIHFVPRDNIVQHAELRRETVIQYA 230

Query: 242 PEEEISKIYMELAESIYQNN-TGTMPNPLENAQIMQI 277
           P+ + +K Y  LA  I+ N+  GT+P P+   ++ ++
Sbjct: 231 PDSQQAKEYRALASKIHANSGNGTIPTPITMEELEEM 267