Pairwise Alignments

Query, 771 a.a., carbamoyltransferase HypF from Methanococcus maripaludis S2

Subject, 771 a.a., hydrogenase maturation protein HypF (RefSeq) from Shewanella amazonensis SB2B

 Score =  387 bits (995), Expect = e-112
 Identities = 248/777 (31%), Positives = 415/777 (53%), Gaps = 42/777 (5%)

Query: 6   IDVKGIVQGVGFRPFIYRIAKKNDLKGYVKNMGNYVEIVVSGKLNNIDAFLSDLKLEKPP 65
           + + GIVQGVGFRP ++R+A +  L G ++N    V I + G  + +D F+  L+   PP
Sbjct: 7   LHITGIVQGVGFRPHVFRLAHELGLGGSIRNDAEGVFIRLMGAQHKVDDFIEKLRSAPPP 66

Query: 66  LSKIDNISIEDIDENENLNEIYGDFTIKLSDTSKIEEEGTIPPDISICDECLKEIMDKKD 125
           L++ID  ++   D+  +L+E    F I+ S     E +  + PD S+C +CL +I +  D
Sbjct: 67  LARIDGFTLI-ADDGSDLDETR--FVIEESQAGG-EAQVVVSPDKSMCPDCLADIRNPSD 122

Query: 126 RRSDYAFTACTNCGPRFTVIEKLPYDRENTSMKDFPLCKSCIEEYKNPEDRRFHAQATCC 185
           R   Y FT CTNCGPR+T+I+ LPYDR++TSM  F +C  C  EYKNP DRR+HAQ   C
Sbjct: 123 RHYRYPFTNCTNCGPRYTLIKALPYDRKHTSMAHFAMCAQCEAEYKNPLDRRYHAQPVSC 182

Query: 186 DICGPELFITDDSGKIISND----ICDAVKFLEEGKILAIKGIGGTHLVCSINSDKSVLE 241
             CGP+L +T   G +IS+D    + +  + L++G I AIKG+GG HLVC    +++V  
Sbjct: 183 PNCGPKLSLTGPDGSLISSDAEFCLDECARLLKQGAIFAIKGLGGFHLVCDATHEEAVSS 242

Query: 242 LRKRLNRPTQAFAIMSRE-EYLDLFSKIDENELNMIKSPKKPIVALK----------KNE 290
           LR R  RP +  A+M ++      F+   + E  ++ S ++PIV +K          K+ 
Sbjct: 243 LRTRKVRPAKPLAVMVKDIAMARSFADGAQEEWQLLSSRERPIVIMKKAAEQHRAVPKDT 302

Query: 291 LYEKYFSEHVSNLNTIGVMLPYSGLHYLLFENTDQIAYIMTSANLPGLPMSIDNEQILEK 350
            + +  +     ++ IG+ LPY+ LH LL ++ D+   + TSAN  G P+ I    I +K
Sbjct: 303 QHRELAASVAPGIDRIGLFLPYTPLHALLLDSVDR-PLVATSANRSGEPIIIAAVDIHQK 361

Query: 351 LENIADYFLLHNRKIVNRCDDSVLKEINGKMELLRRSRGFAPEPVEVNYKKIKNNSKNIL 410
           L  + D+ L H+R IV+ CDDSV++   G+++++R +RG+AP    +     K +  +++
Sbjct: 362 LAGVVDFILDHDRPIVSGCDDSVVQWCAGQLQVIRLARGYAP----LAMLSPKPSKSHLM 417

Query: 411 ALGPELNSVACLVKNNKFYLTQYIGNTGKYETFNYLKDAVENLIKITNTNKIDAIVCDLH 470
           A+GP+  +       +  +L+ +IG+    E  +Y    +E+  ++        +V D H
Sbjct: 418 AVGPQQKNTLGFGLGHNLFLSPHIGDLFSIEAEDYFIRTLESFKRLYQVEP-GCVVADHH 476

Query: 471 PSFNSTIFAKELGEK--YKIPVTQVQHHESHCHSLMGDSDIFENNVTIAIDGLGYGNDGN 528
           P +  + FA+   +     I +  VQHH +H  S+M  +   E  +  + DG G G+D +
Sbjct: 477 PDYAPSRFARRYAQSGDRAIELLTVQHHFAHILSVMAANSRSEPVLGFSFDGTGLGDDMS 536

Query: 529 IWGGEVFLFKNGKIERAGHLEEQIQPGADLASKYPLRMLASILNKANLNVSEIIKGYNYF 588
           +WGGEV L      ER G L     PG D AS  P R+L S+L   +L+ S+ ++G   F
Sbjct: 537 LWGGEVLLCSATHFERLGGLMPFALPGGDKASSEPWRVLLSLL-AGHLSASQ-LQGLPCF 594

Query: 589 SEKELKLILFQLE--KNINVSKTTSTGRVLDSISALVSLCFERTYDGEPSIRLEALANEY 646
           +     ++   L+        +++S GR+ D+ +AL+ +C    ++G+  + LEA A   
Sbjct: 595 AHLSQPMLNNHLKVIGRPGTLQSSSMGRLFDAAAALLGICQRVEFEGQAGMLLEAFAARA 654

Query: 647 TGEISEIEKLVEESIKIENNILDTTSLVVKSLEMLNN-NEKIEKIAYFIHIAIADGLSKI 705
           TG I  +       ++ +    D  +L+V  LE ++  +   E +A     AIAD ++  
Sbjct: 655 TGPIPTL------VLEDKQGQWDGAALLVSMLEQMDTLDTSPECLANAFINAIADAIA-- 706

Query: 706 AIETAKKQSIEYIGITGGVSYNKIISERIVENIKKESLKPLIHKRIPNGDGGISFGQ 762
             E A+      + ++GGV  ++ ++    + + ++ LK L   ++P  DGGI+ GQ
Sbjct: 707 --EKARHYPNLPVALSGGVFQSRTLANATAQRLSQQGLKLLPWGQVPVNDGGIALGQ 761