Pairwise Alignments

Query, 375 a.a., Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain from Methanococcus maripaludis S2

Subject, 466 a.a., iron-sulfur cluster-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 17/84 (20%)

Query: 279 RCIKCYGCRDVCPICFCKECALGEDYLDKGTIPPDPIMFQGIRL------SHMS-FSCIN 331
           +CI+C GC + CP+      + G  Y   G   P PI   GI +      +H S ++C  
Sbjct: 305 KCIRCGGCLNTCPVY---RRSGGYSY---GHTIPGPI---GIAVGADEDDTHSSPWACTL 355

Query: 332 CGQCEDVCPVEIPLAK-IYHRAQL 354
           CG C  VCP ++PL K I+HR +L
Sbjct: 356 CGSCSFVCPTKVPLDKIIFHRRRL 379



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 326 SFSCINCGQCEDVCPV 341
           +  CI CG C + CPV
Sbjct: 303 ALKCIRCGGCLNTCPV 318