Pairwise Alignments

Query, 375 a.a., Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain from Methanococcus maripaludis S2

Subject, 464 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 10/101 (9%)

Query: 279 RCIKCYGCRDVCPICFCKECALGEDYLDKGTIPPDPIMFQGI---RLSHMSFSCINCGQC 335
           +CI+C GC + CP+ + +      +Y    TIP    +  G      + ++++C  CG C
Sbjct: 312 KCIRCGGCLNTCPV-YRRSGGYSYNY----TIPGPIGIAVGATHDNTNSIAWACTLCGSC 366

Query: 336 EDVCPVEIPLAKIYHRAQLKIRETTGFVP-GIDDSMPFLYK 375
             VCP ++PL KI H  + +++   G +P G +  MP + K
Sbjct: 367 TYVCPTKVPLDKIIHHHR-RLKAEAGKLPYGKNAYMPLVGK 406



 Score = 26.6 bits (57), Expect = 0.002
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 326 SFSCINCGQCEDVCPV 341
           S  CI CG C + CPV
Sbjct: 310 SLKCIRCGGCLNTCPV 325