Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 437 a.a., TIGR04014 family B12-binding domain/radical SAM domain-containing protein from Methanococcus maripaludis JJ

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 20/188 (10%)

Query: 78  CKYCGFAAGTSSEGYVKPFRSDDDQIKSSSVAIENSGIKRVSCSSGHG--YNGK------ 129
           C +C        +   KP     +++K     ++ SG+ R++ S G G  YN K      
Sbjct: 171 CTFCQVPEFFGRDIRSKPIELIIEEVKE----LKKSGVNRIAISGGTGSLYNFKNTVNKN 226

Query: 130 ---EVIRALKAVKSASNLEVLVNAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVK 186
              E+I ++  +    NL V       + EE +  +K Y I  +   +E+ +  + N++K
Sbjct: 227 KFIEMIESVSDIIGKQNLSVPDMRVDYVDEEVLNAIKNYSIGWVFYGIESGSDRLLNSMK 286

Query: 187 PGENLEDRINVCKMVKKHGVELSSGLLIGIGETYEDRVEHLF---FLKELDVEEIPIMGF 243
            G N +  +   K+ K  GV+++   +  +G   E  V+ L    F+ + ++E++ +   
Sbjct: 287 KGTNSKKNLKAIKLAKDCGVKVAGSFI--VGHPQEKEVDFLLTKDFIVDAELEDVFVSAA 344

Query: 244 NPYKETPM 251
            P  +T +
Sbjct: 345 EPIPKTEL 352