Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 358 a.a., 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH from Methanococcus maripaludis JJ

 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 77/332 (23%), Positives = 145/332 (43%), Gaps = 65/332 (19%)

Query: 21  KQGLITKSDAIELFNIKNWKDYLELFSIASEVR-DVFKTEIEITSTVHV--TNICSVNPK 77
           K+  I+K D +ELF  ++ +++ ++  +A  +R D+    +      ++  TN+C++   
Sbjct: 7   KEREISKKDCVELF--EDTENFFDILKLADSIRKDIVGDTVTFVKNTNIETTNVCTMG-- 62

Query: 78  CKYCGFAAGTSSEGYVKPFRSDDDQIKSSSVAIENSGIKRVSCSSG-------------- 123
           CK+C F+   +S    + F+ D D+I   +V  + SG+  V+   G              
Sbjct: 63  CKFCAFSVSKNSP---EAFKLDADEIAKKAVIAKKSGLTEVTIHGGIHPDVDTHFQVETI 119

Query: 124 ---------------HGYNGKEVIRALKAVKSASN--LEVLVNAGADLTEECILELKKYK 166
                          H Y+ +E++   +    + N  L++L  AG         E+   +
Sbjct: 120 NKVNSATSKLGGIYTHAYSPQEILNGAENAGLSINEALKMLNEAGLRTIPGTAAEILDDE 179

Query: 167 IDTICCNLETTNKTVFNNVKPGENLEDRINVCKMVKKHGVELSSGLLIGIGETYEDRVEH 226
           + +  C L+ + K               I++ K   K G++ +S ++ G  E Y+  V+H
Sbjct: 180 VRSDICPLKMSTKKW-------------IDIMKTAHKTGIKTTSTIIYGHVEEYKHIVDH 226

Query: 227 LFFLKELDVEEIPIMGFNP----YKETPM----ETCPKCSAIEQAKTIAIVRLLFPDI-- 276
           L  LKE+  E   I  F P    ++ TP+          S + + K  AI R+LF +   
Sbjct: 227 LSILKEIQKETGGITEFIPMSFLHENTPLYKSGRVTDGASGLYELKLYAIARILFKETIK 286

Query: 277 RITSPTPTMGPELSQFALLGGASNI-ATVIPD 307
            I +P   +G +LSQ  L  GA+++  T++ D
Sbjct: 287 NIQAPRVKIGTKLSQLILKSGANDLGGTLVED 318