Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 352 a.a., 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG from Methanococcus maripaludis JJ

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 86/348 (24%), Positives = 145/348 (41%), Gaps = 53/348 (15%)

Query: 24  LITKSDAIELFNIKNWKDYLELFSIASEVRDVFKTEIEITSTVHVTNICSVNPKCKYCGF 83
           +ITKS+A+         D+L+  S  S +  + K   E TS     +  +  P C +C  
Sbjct: 1   MITKSEAL---------DFLKSNSTNSILEKLGKINAENTSKYVTFSKNAFIPVCNWCRN 51

Query: 84  AAGTSSEGYVKPFRSDD------DQIKSSSVAIENSGIKRVSCSSGHGYNGKEVIRA-LK 136
             G  +      FR+++      D++K      +  G +    + G   +  E ++  LK
Sbjct: 52  VCGYCT------FRNENFKLLKMDEMKEILTKADTFGCREALFTFGENVDENEKVKEELK 105

Query: 137 AVKSASNLEVLVNAGADLTEECIL------------ELKKYKIDTICCNLETTNK----- 179
            +  +  LE L    A   E   L            ELK  +       L   N      
Sbjct: 106 KMGYSGILEYLYEISAWCLENTNLLPHTNCGILSYDELKYLREVNASMGLMLENSSARLC 165

Query: 180 -TVFNNVKPGENLEDRINVCKMVKKHGVELSSGLLIGIGETYEDRVEHLFFLKEL----- 233
            T+ +   PG++   RI + +   K  +  ++G+LIGIGET E+R++ +F +K +     
Sbjct: 166 GTIAHEKSPGKDPNLRIEMIENAGKLKIPFTTGILIGIGETLEERIDSIFEIKRIYEKYG 225

Query: 234 DVEEIPIMGFNPYKETPMETCPKCSAIEQAKTIAIVRLLFPDIRITSPTPTMGPELSQFA 293
            ++E+ +  F    + PME   + S IE  K I + +L+  DI I  P P +  E  Q  
Sbjct: 226 HIQEVIVQNFRSKPQIPMENYREPSPIEMFKMIILSKLILDDISIQVP-PNLNRETGQLF 284

Query: 294 LLGGASNIATVIPDNHPMNIKGVGNPKT--GNLKDVICMIKELGLTPK 339
           L+ G  +   V P       K   NP+    +++++    KELG T K
Sbjct: 285 LMAGIDDWGGVSP-----LTKDFVNPEAPWPDIEELNSFSKELGYTLK 327