Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 359 a.a., biotin synthase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 73/326 (22%), Positives = 139/326 (42%), Gaps = 25/326 (7%)

Query: 32  ELFNIKNWKDYLELFSIASEVRDVFKTEIEITSTVHVTNICSVNPKCK-YCGFAAGTSSE 90
           E+ ++   +D   LFS A        TE+E    V++  I   +  C+ +C +    +  
Sbjct: 30  EILSLLQGQDDEWLFSRAK-----LATELEFNQQVYLRGIVEFSNHCRNHCHYCGLRTEN 84

Query: 91  GYVKPFRSDDDQIKSSSVAIENSGIKRVSCSSGHGYN--GKEVIRALKAVKSASNLEVLV 148
             V  +R  +++I ++  +I   G+  V   SG  +N  G  +   +  +K   NL + +
Sbjct: 85  RQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDDFNYSGNRISTLITEIKRHHNLAITL 144

Query: 149 NAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVKPGENLEDRINVCKMVKKHGVEL 208
           + G D   + + + ++   D     +ET ++ +F   +P  N ++RI     +K  G + 
Sbjct: 145 SLG-DRKHQELEKWREAGADRYLLKMETFDRALFAQCRPKANFDERIARLNYLKSLGYQT 203

Query: 209 SSGLLIGI-GETYEDRVEHLFFLKELDVEEIPIMGFNPYKETPMETCPKCSAIEQAKTIA 267
            SG+++ + G T       +  L EL ++ +    F  + +TP  T P  SA++  +  A
Sbjct: 204 GSGIIVDLPGMTDAILARDIQHLSELQLDMLACGPFIAHHQTPFTTSPNGSALKSHRVSA 263

Query: 268 IVRLLFP--DIRITSPTPTMGPELSQFALLGGASNIATVIPDNHPMNIKG---------- 315
           I+RL+ P  +I  TS    +     + AL  G +    ++P   P  + G          
Sbjct: 264 ILRLMNPGANIPATSSLDALDKGAREQALKRGCN---VIMPSFTPTKVSGDYSIYPGKNQ 320

Query: 316 VGNPKTGNLKDVICMIKELGLTPKLN 341
             +P    L  V   I+  GL P  +
Sbjct: 321 QQHPAAERLNQVCQQIQRHGLIPSFS 346