Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 321 a.a., lipoic acid synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 44.3 bits (103), Expect = 4e-09
 Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 20/203 (9%)

Query: 77  KCKYCGFAAGTSSEGYVKPFRSDDDQIKSSSVAIENSGIKRVSCSS--------GHGYNG 128
           +C +C  A G       +P + D+ +    +  I +  +K V  +S        G   + 
Sbjct: 97  RCPFCDVAHG-------RPLKPDEQEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHF 149

Query: 129 KEVIRALKAVKSASNLEVLVNAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVKPG 188
            + IR ++ +     +E+LV       +  +  L     D    NLET     +   +PG
Sbjct: 150 ADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMH-YRKARPG 208

Query: 189 ENLEDRINVCKMVKKH--GVELSSGLLIGIGETYEDRVEHLFFLKELDVEEIPIMGF-NP 245
            N +  +++ K  K+    V   SGL++G+GET ++  + L  L+E  VE + +  +  P
Sbjct: 209 ANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNDEIAQVLRDLREHKVEMLTLGQYLQP 268

Query: 246 YK-ETPMETCPKCSAIEQAKTIA 267
            K   P+E     +  ++ K +A
Sbjct: 269 SKFHLPVERYVSPAEFDELKALA 291