Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 375 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 42.7 bits (99), Expect = 1e-08
 Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 205 GVELSSGLLIGIGETYEDRVEHLFFLKELDVEEIPIMGFNPYKETPMETC----PKCSAI 260
           G+  ++ ++ G  ET+  R++HLF ++++         F P+   P  T     P+  A 
Sbjct: 223 GLRTTATMMFGHEETHAHRLDHLFAVRDVQDRTGGFTAFIPWTFQPANTAIDRDPE-PAP 281

Query: 261 EQAKTIAIVRLLFPDI-RITSPTPTMGPELSQFALLGGASNIATVIPDNHPMNIKGVGNP 319
              + +A+ R++  +I  I +   TMGP ++Q AL  GA++  +++ + + +   GV   
Sbjct: 282 AYLRLLALSRIVLDNIDNIQASWVTMGPHVAQLALFYGANDFGSLMIEENVVAAAGVSFS 341

Query: 320 KTGNLKDVICMIKELGLTP 338
            +    ++  +I+  G TP
Sbjct: 342 LSRG--EIHKIIRAAGFTP 358