Pairwise Alignments

Query, 341 a.a., 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB from Methanococcus maripaludis S2

Subject, 321 a.a., lipoyl synthase (RefSeq) from Shewanella sp. ANA-3

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 20/203 (9%)

Query: 77  KCKYCGFAAGTSSEGYVKPFRSDDDQIKSSSVAIENSGIKRVSCSS--------GHGYNG 128
           +C +C  A G       +P + D ++    +  I +  +K V  +S        G   + 
Sbjct: 97  RCPFCDVAHG-------RPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHF 149

Query: 129 KEVIRALKAVKSASNLEVLVNAGADLTEECILELKKYKIDTICCNLETTNKTVFNNVKPG 188
            + IR ++ +     +E+LV       +  +  L     D    NLET     +   +PG
Sbjct: 150 ADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMH-YRKARPG 208

Query: 189 ENLEDRINVCKMVKKH--GVELSSGLLIGIGETYEDRVEHLFFLKELDVEEIPIMGF-NP 245
            N +  +++ K  K+    V   SGL++G+GET E+  + L  L+E  VE + +  +  P
Sbjct: 209 ANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRDLREHKVEMLTLGQYLQP 268

Query: 246 YK-ETPMETCPKCSAIEQAKTIA 267
            K   P+E     +  ++ K +A
Sbjct: 269 SKFHLPVERYVSPAEFDELKVLA 291