Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 377 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  242 bits (618), Expect = 9e-69
 Identities = 135/342 (39%), Positives = 206/342 (60%), Gaps = 34/342 (9%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           +RL  ISK+F+   ++ +++ +    E ++++G SGCGKTT LR+IAGFE  D G+I L+
Sbjct: 18  IRLSGISKSFDGKEIIGNLNLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADQGQILLD 77

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
            +D+T VP  +R++  VFQ+YALFPH+ VFEN+A+GL+++K    +I  +V  ++ +V L
Sbjct: 78  DQDVTQVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVPQSEIEPRVMEALRMVRL 137

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
               +    +LSGG QQR+AIARA+V +PK +LLDE LS LD KLR +M+ ELK+LQR  
Sbjct: 138 AEMAQRKPHQLSGGQQQRIAIARAVVNKPKVLLLDESLSALDYKLRKQMQSELKQLQRQL 197

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLS 241
            I  I+VTHDQEEAL++SD++ VM  GKIEQ G P  IY +PK  FVA+FIG IN    +
Sbjct: 198 GITFIFVTHDQEEALSMSDRIIVMRSGKIEQDGSPREIYEDPKNLFVARFIGEINVFQAT 257

Query: 242 ILNELD--------------------IESGDK-KYFVRPESIEI------GKGNFKGKLV 274
            ++ +D                    +++GDK +  +RPE + I       +    G + 
Sbjct: 258 TIDRIDEKRIRVDIEGIESIVYYEDEVKAGDKLQVLLRPEDLRIEEIKESEEKGIVGHVT 317

Query: 275 DYEFLGSIIRYVIKYGDSL------FTIQSNKLVDFKLGTEI 310
           D  + G  +  V++    +      F  + +  VD  +G ++
Sbjct: 318 DRTYKGMTLESVVELESGMCVMVSEFFNEDDPDVDHSIGQKV 359