Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 374 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit from Pseudomonas syringae pv. syringae B728a

 Score =  229 bits (584), Expect = 8e-65
 Identities = 126/308 (40%), Positives = 192/308 (62%), Gaps = 33/308 (10%)

Query: 8   ISKNFEKHGVLT---DIDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLNGED 64
           + K+++   ++    ++D   GE L +L+G SG GKTT L ++AGFE P AG+I L G  
Sbjct: 20  VQKSYDGEALIVKDLNLDIRKGEFL-TLLGPSGSGKTTSLMMLAGFETPTAGEILLGGRA 78

Query: 65  ITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNLGGY 124
           I NVPP+KR+IG+VFQNYALFPH+ V EN+A+ L ++  S  D+ +KVK ++ +V L  +
Sbjct: 79  INNVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVGEKVKKALGMVQLDTF 138

Query: 125 -EKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNFEI 183
             +YP ++LSGG QQRVA+ARA+V EP+ +L+DEPL  LD +LR  M+ E+K L +   +
Sbjct: 139 AHRYP-AQLSGGQQQRVALARALVFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGV 197

Query: 184 PTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINEIPLSIL 243
             +YVTHDQ EAL +SD+VAV ++G+I+Q   P S+Y  PK  FVA FIG  N +   ++
Sbjct: 198 TVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNTFVANFIGENNRLNGRLV 257

Query: 244 NE------LDIESGDKKY---------------FVRPESIEIG------KGNFKGKLVDY 276
           ++      +++E G+K +                +RPE I +          F G++ ++
Sbjct: 258 SQDGDRCVVELERGEKVHALAINVGQPGGPVTLSIRPERINLNGRSESCANRFSGRVAEF 317

Query: 277 EFLGSIIR 284
            +LG  +R
Sbjct: 318 IYLGDHVR 325