Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 342 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  244 bits (623), Expect = 2e-69
 Identities = 142/339 (41%), Positives = 211/339 (62%), Gaps = 24/339 (7%)

Query: 3   LRLENISKNFEKHG--VLTDIDFECGEELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFL 60
           L+LE +SK +      V T++  + GE  VSL+G SGCGKTT L++IAGF +   G+I L
Sbjct: 4   LQLEGLSKRYGSIDAVVATNLAVDKGE-FVSLLGPSGCGKTTTLQMIAGFVEVSDGRIVL 62

Query: 61  NGEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVN 120
           +G DIT+  P+ R +G+VFQ+YALFPH+ V +N+A+GL+++K +  ++  +VK  ++LV 
Sbjct: 63  DGRDITHAKPSSRGLGVVFQSYALFPHMTVADNVAFGLRMRKVAAAELHPRVKRVLELVR 122

Query: 121 LGGY-EKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQR 179
           LG + E+YP  ELSGG +QRVA+ARA+VIEP  +LLDEPLSNLDA LR +M+ E++ +Q 
Sbjct: 123 LGQHAERYP-RELSGGQRQRVALARALVIEPPVLLLDEPLSNLDANLREEMQFEIRRIQN 181

Query: 180 NFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIIN--- 236
              I T+ VTHDQ EAL+ISD+V VM  G+I Q  +PY +Y +P+T F++ F+G  N   
Sbjct: 182 EVGITTLMVTHDQAEALSISDRVVVMQAGRITQIDEPYKLYEHPRTRFISGFVGKANMLQ 241

Query: 237 -EIPLSILNELDIESGDKK--YFVRPESIEI---GKGNFKGKLVDYEFLGSIIRY----- 285
            ++  S + ++    GD      +RPE I++   G G   G++V   FLGS   Y     
Sbjct: 242 GDLDSSGIPQIRQVPGDGSLTLSLRPEKIDLVAPGCGRLSGRIVTRYFLGSQWLYRIETG 301

Query: 286 -----VIKYGDSLFTIQSNKLVDFKLGTEILFEFDKNSI 319
                V++  D    ++    VD     E+L   D + +
Sbjct: 302 IGEVTVVRRNDGQAPLEQGAAVDMDWPDELLRVLDADEV 340