Pairwise Alignments

Query, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 463 a.a., spermidine/putrescine transport ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  240 bits (612), Expect = 6e-68
 Identities = 122/235 (51%), Positives = 162/235 (68%), Gaps = 1/235 (0%)

Query: 3   LRLENISKNFEKHGVLTDIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGKIFLN 61
           + + ++SK F     L D+     + E V+++G SGCGKTT LR+IAGF+    G+I ++
Sbjct: 10  IEVSHVSKFFGDKTALDDVTLNVKKGEFVTILGPSGCGKTTLLRLIAGFQTASEGEIRIS 69

Query: 62  GEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSIDLVNL 121
           G++IT  PP+KR +  VFQ YALFPHLNV++NIA+GLKLKK     I KKVK ++ +V +
Sbjct: 70  GKEITQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLKKTPKQTIGKKVKAALKMVGM 129

Query: 122 GGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKELQRNF 181
             YE   +  LSGG QQRVAIARAIV EP+ +LLDEPL+ LD K+R  M+ ELKE+ ++ 
Sbjct: 130 TDYEYRDVDSLSGGQQQRVAIARAIVNEPEVLLLDEPLAALDLKMRKDMQMELKEMHKSL 189

Query: 182 EIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIIN 236
            I  +YVTHDQEEAL +SD + VM+ GKI+Q G P  IY+ P   FVA FIG  N
Sbjct: 190 GITFVYVTHDQEEALTLSDTIVVMSEGKIQQIGTPIDIYNEPINSFVADFIGESN 244