Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (719), Expect = 6e-80
 Identities = 163/533 (30%), Positives = 304/533 (57%), Gaps = 17/533 (3%)

Query: 21  VFLLIFIIYPVFTVFLQSFYGSNG-FTLDAYSKFISDSYYFGILKNSIVVACFSTIISIF 79
           + ++IFI+YP   +FL  F    G +T   +   +S S+   ++ NSI +     + + F
Sbjct: 157 LLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVGVGATF 216

Query: 80  LGFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGLL---GLE 136
            G +F+I   +   +     ++   LPI+TP FI  L    + GR G +T  ++   GL+
Sbjct: 217 FGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQ 276

Query: 137 PN--IYGWKSVVIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVFKKVTFPL 194
               +YG+  + + Q + +   +F I+   L  +    E+A+  L +N +Q F  +  PL
Sbjct: 277 KTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPL 336

Query: 195 LIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIG-RYNTQMASTLSVILLF 253
           L P + ++ L+IF+QS+ADF  P+++GG+F+ LAT  YF I G + +   ASTL  +LL 
Sbjct: 337 LKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQIYFYIAGAQLDYASASTLGSVLLL 396

Query: 254 PSMALFYLYSKY--HKGYELKKSKITKYSLSNIQKVI-LGIPAVFFS--IIAYLLFFAVF 308
            S+A+F +   +   + Y     K  +  +  +   + LG+    ++  I   LL+ ++F
Sbjct: 397 FSLAIFVVQYLWIGQRSYVTISGKAYRGDVQEMPASLKLGVTVTLYAWMIFNVLLYGSIF 456

Query: 309 VASFTKSFGHNYALT----LDYFYEAISAGQL-AIKNTLIYAMSSSILVAFLGVAYSYIV 363
             SFT ++G +Y LT    L+ F   +S G   ++  T+IYA  ++ + A  G+  +Y+V
Sbjct: 457 FGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGVAAPITALFGLLIAYVV 516

Query: 364 YRGKFFGRKLMDLVITLPFAIPGTFMGLGYLLAFNNYPLLLTGTSSIIILNCMVRKLPFS 423
            R +F+G+K+++    L FA+PGT  G+ Y+LAFN+ P+ LTGT++I++++ ++R +P  
Sbjct: 517 VRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAPIYLTGTAAIVVISMVMRNVPVG 576

Query: 424 FKTGNSVLSQVEESVEEASLNLGASRLKTFYNVVLPLLKPAIIFSMIYTFIATIKSLGSI 483
            ++G + L Q+++S++EASL+L AS L+T   ++LPLL+PAI+ +++Y+F+  + ++ +I
Sbjct: 577 IRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAI 636

Query: 484 IFLMTANTKVLSAMVFESTINRQLGVGACYSMFMVILSIIGILGILRLKGDKK 536
           IFL+T  T+V ++ +     + + G+   Y   ++++ +  IL    L G+ +
Sbjct: 637 IFLVTPETRVATSYILNRVEDGEYGIAIAYGSVLIVVMLAIILLFDLLVGEAR 689



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 13/267 (4%)

Query: 13  IYPKILANVFLLIFIIYPVFTVFLQSFYGSNGFT-LDAYSKFISDSYYFGILKNSIVVAC 71
           +Y  ++ NV L   I +  FTV     Y       L+ +   +SD  +  ++   I    
Sbjct: 441 LYAWMIFNVLLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAWPSLITTMIYAGV 500

Query: 72  FSTIISIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYG 131
            + I ++F G L + ++ +  F  K   + +  L    PG ++ ++Y+  F  + A  Y 
Sbjct: 501 AAPITALF-GLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAF--NDAPIY- 556

Query: 132 LLGLEPNIYGWKSVVIMQSIDYTTTAFFIISAVLLG-ISGEFEDAARNLGSNEFQVFKKV 190
                  + G  ++V++  +              LG +    ++A+ +L ++  Q  + +
Sbjct: 557 -------LTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYI 609

Query: 191 TFPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLATASYFEIIGRYNTQMASTLSVI 250
             PLL P ILS  +  F+++M      I +      +AT+     +      +A     +
Sbjct: 610 ILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSV 669

Query: 251 LLFPSMALFYLYSKYHKGYELKKSKIT 277
           L+   +A+  L+        + +SK T
Sbjct: 670 LIVVMLAIILLFDLLVGEARVSRSKAT 696