Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 273 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 67/255 (26%), Positives = 117/255 (45%), Gaps = 27/255 (10%)

Query: 289 LGIPAVFFSIIAYLLFFAVFVASFTKSFGHNYALTLDYFYEAISAGQL--AIKNTLIYAM 346
           LG   V+ S+I  +   A+FV        H   LT D F+  I+A ++  A+K +   A 
Sbjct: 16  LGYTLVYLSLIVLIPLAAMFV--------HAAQLTWDQFWTIITAPRVIAALKLSFGTAF 67

Query: 347 SSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIPGTFMGL------------GYL 394
            ++++   +G   ++++ R  F GRK++D +I LPFA+P    G+            G  
Sbjct: 68  YAALINGVIGTLLAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYAPNGWVGQF 127

Query: 395 LAFNNYPLLLTGTSSIIILNCMVRKLPFSFKTGNSVLSQVEESVEEASLNLGASRLKTFY 454
            A   + +  T     + L  +   LPF  +T   VL+ +   VEEA+  LGA  L+ F 
Sbjct: 128 AADLGFKIAYTPLGITLALTFVT--LPFVVRTVQPVLADIPREVEEAAACLGARPLQVFR 185

Query: 455 NVVLPLLKPAIIFSMIYTFIATIKSLGSIIFL---MTANTKVLSAMVFESTINRQLGVGA 511
           ++++P L PA +      F   +   GS+IF+   M   T++L  ++             
Sbjct: 186 HILVPALLPAWLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGAT 245

Query: 512 CYSMFMVILSIIGIL 526
              + M+++S I +L
Sbjct: 246 AIGVMMLVVSFILLL 260



 Score = 70.5 bits (171), Expect = 8e-17
 Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 10/255 (3%)

Query: 21  VFLLIFIIYPVFTVFLQSFYGSNGFTLDAYSKFISDSYYFGILKNSIVVACFSTIISIFL 80
           V+L + ++ P+  +F+ +       T D +   I+       LK S   A ++ +I+  +
Sbjct: 21  VYLSLIVLIPLAAMFVHAAQ----LTWDQFWTIITAPRVIAALKLSFGTAFYAALINGVI 76

Query: 81  GFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGLLGLEPNIY 140
           G L + ++ +  F  +      + LP   P  ++ +A   L+  +G V      L   I 
Sbjct: 77  GTLLAWVLVRYTFPGRKVIDAMIDLPFALPTAVAGIALTALYAPNGWVGQFAADLGFKI- 135

Query: 141 GWKSVVIMQSIDYTTTAFFI--ISAVLLGISGEFEDAARNLGSNEFQVFKKVTFPLLIPG 198
            +  + I  ++ + T  F +  +  VL  I  E E+AA  LG+   QVF+ +  P L+P 
Sbjct: 136 AYTPLGITLALTFVTLPFVVRTVQPVLADIPREVEEAAACLGARPLQVFRHILVPALLPA 195

Query: 199 ILSAGLLIFMQSMADFGTPIIVGGNF---NTLATASYFEIIGRYNTQMASTLSVILLFPS 255
            L+   L F + + ++G+ I + GN      +        + +Y+   A+ + V++L  S
Sbjct: 196 WLTGFALAFARGVGEYGSVIFIAGNMPMKTEILPLLIMVKLDQYDYTGATAIGVMMLVVS 255

Query: 256 MALFYLYSKYHKGYE 270
             L  L +   +  E
Sbjct: 256 FILLLLINLLQRRIE 270