Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 6/226 (2%)

Query: 33  TVFLQSFYGSNGFTLDAYSKFISDSYYFGILKNSIVVACFSTIISIFLGFLFSIIIFKTD 92
           T+   +F  S  +TL  Y + +++S++  +   S+V +   T+I++ L F ++ ++ +T 
Sbjct: 63  TLDTNTFLMSESYTLANYQRVLTESFFATVAGRSLVGSVIVTVITLLLAFPYAYLMVRTP 122

Query: 93  FK-FKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVT--YGLLGLEPN--IYGWKSVVI 147
               + F  +A+FLP      + +  ++ + G  G V    GL+G+ P   +Y + +V+ 
Sbjct: 123 SSALRKFLLVALFLPFFIGQVVRAYGWLIILGNQGMVNEALGLVGVPPIRLLYNYPAVLF 182

Query: 148 MQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVFKKVTFPLLIPGILSAGLLIF 207
                    A  +++  L  I  E E AA +LG+   + F+ +  PL  PG++ AGL++ 
Sbjct: 183 GLVQYMLPFAVLMLAPALTAIPSELEAAAASLGAGWTRTFRHIVLPLSRPGLVGAGLVVL 242

Query: 208 MQSMADFGTPIIVGGNF-NTLATASYFEIIGRYNTQMASTLSVILL 252
             S+ DF  P I+GG   + +A A Y +     +  M +TLS++L+
Sbjct: 243 TLSLTDFAIPAILGGGTQDFIANAIYDQFFRTSDQGMGATLSLMLV 288



 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 49/241 (20%), Positives = 101/241 (41%), Gaps = 28/241 (11%)

Query: 319 NYALTLDYFYEAISAGQLAIKNTLIYAMSSSILVAFLGVAYSYIVYRGKFFG-RKLMDLV 377
           NY   L   + A  AG+  + + ++     +++   L   Y+Y++ R      RK + + 
Sbjct: 79  NYQRVLTESFFATVAGRSLVGSVIV-----TVITLLLAFPYAYLMVRTPSSALRKFLLVA 133

Query: 378 ITLPFAIPGTFMGLGYLLAFNNY-------------PLLLTGTSSIIILNCMVRKLPFSF 424
           + LPF I       G+L+   N              P+ L      ++   +   LPF+ 
Sbjct: 134 LFLPFFIGQVVRAYGWLIILGNQGMVNEALGLVGVPPIRLLYNYPAVLFGLVQYMLPFAV 193

Query: 425 KTGNSVLSQVEESVEEASLNLGASRLKTFYNVVLPLLKPAIIFSMIYTFIATIKSLGSII 484
                 L+ +   +E A+ +LGA   +TF ++VLPL +P ++ + +     ++       
Sbjct: 194 LMLAPALTAIPSELEAAAASLGAGWTRTFRHIVLPLSRPGLVGAGLVVLTLSLTDFAIPA 253

Query: 485 FLMTANTKVLSAMVFESTI-NRQLGVGACYSMFMVILS--IIGIL------GILRLKGDK 535
            L       ++  +++        G+GA  S+ +V +   ++G++      G L + GD+
Sbjct: 254 ILGGGTQDFIANAIYDQFFRTSDQGMGATLSLMLVAVGSMLVGVVFMLFGAGTLAMTGDR 313

Query: 536 K 536
           K
Sbjct: 314 K 314



 Score = 24.6 bits (52), Expect = 0.005
 Identities = 9/24 (37%), Positives = 16/24 (66%)

Query: 286 KVILGIPAVFFSIIAYLLFFAVFV 309
           +++   PAV F ++ Y+L FAV +
Sbjct: 172 RLLYNYPAVLFGLVQYMLPFAVLM 195