Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 275 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score = 90.5 bits (223), Expect = 7e-23
 Identities = 62/249 (24%), Positives = 116/249 (46%), Gaps = 19/249 (7%)

Query: 21  VFLLIFIIYPVFTVFLQSFYGSN-------GFTLDAYSKFISDSYYFGILKNSIVVACFS 73
           V +L+F++ P+  +   SF G         GF+L  Y+ F++D  +   L+NS+++   S
Sbjct: 23  VGVLVFLMAPILAIIPLSFNGGQFLTYPLQGFSLRWYAAFLTDPVWIRALRNSLIIGIVS 82

Query: 74  TIISIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLFGRHGAVTYGLL 133
           TI++  LG L S+ + +  F+ K      +  P+I P  I+++ +   F          L
Sbjct: 83  TILATGLGTLASLGLVRAKFRGKGLVMAVLLSPMIVPVVITAVGFYLFFAP--------L 134

Query: 134 GLEPNIYGWKSVVIMQSIDYTTTAFFIISAVLLGISGEFEDAARNLGSNEFQVFKKVTFP 193
           GL  N  G   +++  ++         ++A L G       AA +LG+++   F++V  P
Sbjct: 135 GLTANYPG---LILAHTVLAAPFVVISVTATLQGFDMNLARAAASLGADQVTTFRRVILP 191

Query: 194 LLIPGILSAGLLIFMQSMADFGTPIIVGG-NFNTLATASYFEIIGRYNTQMASTLSVILL 252
           L+ PG+ S  L  F  S  +    ++V G    TL    +  I    +  + +  +V++L
Sbjct: 192 LIAPGVASGALFAFATSFDEVVVVLLVAGPEQRTLPREMFSGIRENISPTITAVATVLIL 251

Query: 253 FPSMALFYL 261
           F ++ L  L
Sbjct: 252 FSTLLLIAL 260



 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 2/163 (1%)

Query: 337 AIKNTLIYAMSSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIPGTFMGLGYLLA 396
           A++N+LI  + S+IL   LG   S  + R KF G+ L+  V+  P  +P     +G+ L 
Sbjct: 71  ALRNSLIIGIVSTILATGLGTLASLGLVRAKFRGKGLVMAVLLSPMIVPVVITAVGFYLF 130

Query: 397 FNNYPLLLTGTSSIIILNCMVRKLPFSFKTGNSVLSQVEESVEEASLNLGASRLKTFYNV 456
           F   PL LT     +IL   V   PF   +  + L   + ++  A+ +LGA ++ TF  V
Sbjct: 131 FA--PLGLTANYPGLILAHTVLAAPFVVISVTATLQGFDMNLARAAASLGADQVTTFRRV 188

Query: 457 VLPLLKPAIIFSMIYTFIATIKSLGSIIFLMTANTKVLSAMVF 499
           +LPL+ P +    ++ F  +   +  ++ +     + L   +F
Sbjct: 189 ILPLIAPGVASGALFAFATSFDEVVVVLLVAGPEQRTLPREMF 231