Pairwise Alignments

Query, 538 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 544 a.a., iron(III) ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 113/505 (22%), Positives = 218/505 (43%), Gaps = 55/505 (10%)

Query: 63  LKNSIVVACFSTIISIFLGFLFSIIIFKTDFKFKNFFKIAVFLPIITPGFISSLAYVFLF 122
           + NS+ +  + +I S+ L    + ++ + +F  + + + A+ LP+  P +I +  Y  L 
Sbjct: 51  IANSLWLILWVSIGSLLLALPCAWLMARCEFVGRRYLQWALLLPLAMPAYIVAYVYTDLL 110

Query: 123 GRHGAVTYGLLGLEPNIYGWKS--------------VVIMQSIDYTTTAFFIISAVLLGI 168
              G V   L  L    +GW S                 + S+      + +     +  
Sbjct: 111 DYAGPVQRSLRAL----FGWSSPQDYFFPDIRTLGGAACVLSLVLFPYIYLLARTAFMEQ 166

Query: 169 SGEFEDAARNLGSNEFQVFKKVTFPLLIPGILSAGLLIFMQSMADFGTPIIVGGNFNTLA 228
           S     A+R +G + +Q F +++ P+  P +     L+ M++ ADF T         TL 
Sbjct: 167 SLNLAHASRIMGCSPWQSFWRLSLPMARPALAVGVALVAMETAADFATVNYFA--VPTLT 224

Query: 229 TASYFEIIGRYNTQMASTLSVILLFPSMALFYLYSKYHKGYEL--KKSKITK---YSLSN 283
           TA Y   +G  N   A+ LS I+L    +L  +     +  +L  K+S+I     Y LS 
Sbjct: 225 TAVYDTWLGYGNLTAAAKLSAIILLVVFSLIGVERFARRKQQLFQKQSRIQAIDLYRLSP 284

Query: 284 IQKVILGIPAVFFSIIAYLLFFAVFVASFTKSFGHNYALTLDYFYEAISA--GQLAIKNT 341
           +Q  +LG+          LL  A  + S     G   +  ++YF ++      QL++ N+
Sbjct: 285 MQ-TLLGL-----GYCGMLLLLAFVLPS-----GILLSYAINYFEQSWDPLFWQLSV-NS 332

Query: 342 LIYAMSSSILVAFLGVAYSYIVYRGKFFGRKLMDLVITLPFAIPGTFMGLGYLL------ 395
           L  A+ +S++   + +   +I          L   + +  +A+PGT + +G L+      
Sbjct: 333 LTLALITSLVCCVIALVLMFIRRVSPRSSDALPSRLASTGYALPGTVLAIGVLVPLTLLD 392

Query: 396 -AFNNYP---------LLLTGTSSIIILNCMVRKLPFSFKTGNSVLSQVEESVEEASLNL 445
            A N+           LLLTG++  ++    VR +  +  +  S   ++  S++  SL L
Sbjct: 393 FAINDIADWLGMAGPGLLLTGSTVALVFAFCVRFVAIAIGSVESSYKRISPSLDMVSLTL 452

Query: 446 GASRLKTFYNVVLPLLKPAIIFSMIYTFIATIKSLGSIIFLMTANTKVLSAMVFESTINR 505
           G S  +    V LPLL   +    +  FI ++K L + + L     + L+  VF+   + 
Sbjct: 453 GQSPRRLLQRVHLPLLTKGLFAGALLVFIESMKELPAALLLRPIGFENLATYVFQFVSDE 512

Query: 506 QLGVGACYSMFMVILSIIGILGILR 530
           +L  GA  ++ +V++ ++ ++ + R
Sbjct: 513 KLEHGALPAIVIVLVGLVPLIYLNR 537