Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 333 a.a., extracellular solute-binding protein, family 1 from Pseudomonas syringae pv. syringae B728a

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 78/258 (30%), Positives = 128/258 (49%), Gaps = 17/258 (6%)

Query: 46  LDLIADEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDGLLE 105
           L  IAD     TG+++   + +SG+AL+++ AEQ+ P ADV +  G+   + AQ+ G+++
Sbjct: 42  LKAIADS----TGVQVPLDNKNSGQALAQIVAEQAAPVADV-VYYGVTFGLQAQKAGVVD 96

Query: 106 AYKSPNAKDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLITDDYKGE 165
            YK  +  +I     + +G+W  +   T+GI+ N D L   GLP PQ+W DL+  +YKG 
Sbjct: 97  TYKPKHWDEIPAGLKDPEGHWFAIHSGTLGIMVNVDALG--GLPVPQSWADLLKPEYKGM 154

Query: 166 LIASNPTVSGTAYFTICGILQMYGE-----DEGWNYLDKFYQNTPFLTKRGSGPGNLVTA 220
           +   +P+ +   Y +   I Q  G          +Y  K  +N+P + K+ +     V +
Sbjct: 155 VGYLDPSSAFVGYVSAVAINQAMGGTLDNFGPAIDYFQKLAKNSPIVPKQTAYA--RVLS 212

Query: 221 GEYAYGVAPD--PHTTVIADSELPVKSVFLNKVIWWPSPVSIVSGAKHPENAKIFVDWCL 278
           GE    V  D   +     D       +     I  P  +S+V+ A H  NA+  +D+ L
Sbjct: 213 GELPILVDYDFNAYRARYKDKANVAFVIPKEGTIGVPYVMSMVAKAPHRANAEKVLDFVL 272

Query: 279 SKEGQEVLMQASPRVPVR 296
           S EGQ +  +A  R PVR
Sbjct: 273 SDEGQALWAKAYLR-PVR 289