Pairwise Alignments

Query, 343 a.a., ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 366 a.a., transport system substrate-binding protein from Synechococcus elongatus PCC 7942

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 60/269 (22%), Positives = 105/269 (39%), Gaps = 19/269 (7%)

Query: 43  YGSLDLIADEFEKDTGIKMEYVSLSSGEALSRLKAEQSNPSADVWLGGGIDAFISAQQDG 102
           Y + + I  EF + TGIK+  +   +   L+RLK+E S   ADV++         A Q  
Sbjct: 58  YNTDNQIYREFTQKTGIKVNLIEGEADALLARLKSEGSRSPADVFITVDAGRLWQATQAN 117

Query: 103 LLEAYKSPNA----KDIDPLFVEEDGYWTGVSLVTIGILENTDLLSEKGLPEPQTWDDLI 158
           LL       A    + +     +  G W  +S     I+ N D ++   L    T++DL 
Sbjct: 118 LLRPLTQAQAPKLYQAVPANLRDPQGRWFALSKRARVIMYNRDRVNASQL---STYEDLA 174

Query: 159 TDDYKGE-LIASNPTVSGTAYFTICGILQMYGEDEGW--NYLDKFYQ-----NTPFLTKR 210
              ++ + L+ S+  V   +            + E W    +  F +     +TP +   
Sbjct: 175 NPKWRNQILVRSSSNVYNLSLTGEMIAADGAAKTEAWARGLVQNFARQPQGGDTPQILAC 234

Query: 211 GSGPGNLVTAGEYAYGVAPDPHTTVIADSELPVKSVFLNKVIWWP----SPVSIVSGAKH 266
            +G G+L  A  Y              ++   +K  F N+         S   IV  A +
Sbjct: 235 AAGVGSLAIANTYYLVRLFKSKKAEEREAARKIKVFFPNQKGRGTHVNISGAGIVRTAPN 294

Query: 267 PENAKIFVDWCLSKEGQEVLMQASPRVPV 295
           P  A++ +++ LS + Q V  + +   PV
Sbjct: 295 PRAAQLLLEYLLSSQAQAVFARGNGEYPV 323