Pairwise Alignments

Query, 186 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 188 a.a., ECF transporter S component from Methanococcus maripaludis JJ

 Score = 86.7 bits (213), Expect = 2e-22
 Identities = 52/178 (29%), Positives = 96/178 (53%), Gaps = 2/178 (1%)

Query: 10  ILMFSIGLNVFGTYLESIYLFPLYLDSIGTIFSAIILGPHIGALVGLITNLITGCLLSGE 69
           I  F I +NV G ++ + Y  P++L+++GTI   ++LGP  GAL GL +NLI G  ++  
Sbjct: 9   ITAFGISINVLGGFIATSYDLPIFLNNLGTILCGLLLGPAGGALTGLFSNLIIGSTVNSV 68

Query: 70  NFLFSVVNVLIGLTTGIMLYKNQINIKNIFLAAIVVSIVSSIMGNLLSIYFFGG-ITEGG 128
              F++VNV++G   G    K+     ++ L A ++SI++  +   + ++ FGG + +  
Sbjct: 69  YIPFTIVNVVVGFVAGYAAIKHDREFTSMILHAFLISIIALCLVIPIEMFIFGGPLDQTI 128

Query: 129 VGHITQTLTAFGESIPTAAFAAGLYTNFADKIISFTAAFFMIYVLQDKLSIYDLKLGN 186
           + + T      G +I  A + A      AD ++S   A+ ++ +L  K+ +  LK+ N
Sbjct: 129 LSYATTINLNTGLNISAAIYFAEFPLMIADIVLSAIWAYVVLMLLPKKV-LDILKINN 185