Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 168 a.a., ferredoxin-type protein NapF from Vibrio cholerae E7946 ATCC 55056

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 22/122 (18%)

Query: 71  CEHCGACLNVCPVDAIEKN-------RFSVDPEKCIKCGVCSIFCTIPIL--KNEIPVLN 121
           C  CG C+  C    IEK         FS+D  +C  C  C+  C  P+   ++E P   
Sbjct: 40  CTRCGKCVTACETHIIEKGDGGFPTVNFSID--ECTFCYQCAQSCPEPLFVAQSEAPWQA 97

Query: 122 VPEVTTECN-----NCKLCIQKCPQKAISF-----EDGKISINSK-CNLCLKCVEFCPLN 170
              +T  C       C+ C   CP++AI F           +NS+ C+ C  CV  CP N
Sbjct: 98  KVHITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSN 157

Query: 171 AL 172
           A+
Sbjct: 158 AM 159



 Score = 45.8 bits (107), Expect = 4e-10
 Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 15/120 (12%)

Query: 96  EKCIKCGVCSIFCTIPILKNE---IPVLNVPEVTTECNNCKLCIQKCPQKAISFED---- 148
           ++C +CG C   C   I++      P +N      EC  C  C Q CP+     +     
Sbjct: 38  DECTRCGKCVTACETHIIEKGDGGFPTVNFS--IDECTFCYQCAQSCPEPLFVAQSEAPW 95

Query: 149 -GKISINSKCNL-----CLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICP 202
             K+ I   C       C  C + CP  A+    +  ++   +V+   C  C  C  +CP
Sbjct: 96  QAKVHITHHCLAQQQVECRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCP 155



 Score = 38.9 bits (89), Expect = 5e-08
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 117 IPVLNVPEV-TTECNNCKLCIQKCPQKAISFEDGKI-SIN---SKCNLCLKCVEFCPLNA 171
           +P L  P+  T EC  C  C+  C    I   DG   ++N    +C  C +C + CP   
Sbjct: 27  LPWLARPDAFTDECTRCGKCVTACETHIIEKGDGGFPTVNFSIDECTFCYQCAQSCPEPL 86

Query: 172 LKSPKESLKSKIIKVD----LNSCIFCKDCEEICP 202
             +  E+     + +         + C+ C++ CP
Sbjct: 87  FVAQSEAPWQAKVHITHHCLAQQQVECRSCQDACP 121



 Score = 36.6 bits (83), Expect = 3e-07
 Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)

Query: 35  IGETTNPEL--DDCICCGLCVDVCPTNAISV 63
           IG T +P++  + C  CG CV VCP+NA++V
Sbjct: 131 IGRTASPQVNSEQCSGCGACVSVCPSNAMTV 161



 Score = 34.3 bits (77), Expect = 1e-06
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 20/91 (21%)

Query: 38  TTNPELDDCICCGLCVDVCP-----TNAISVFKFRDIICEHCGA--------CLNVCPVD 84
           T N  +D+C  C  C   CP       + + ++ +  I  HC A        C + CP +
Sbjct: 64  TVNFSIDECTFCYQCAQSCPEPLFVAQSEAPWQAKVHITHHCLAQQQVECRSCQDACPEE 123

Query: 85  AI-------EKNRFSVDPEKCIKCGVCSIFC 108
           AI             V+ E+C  CG C   C
Sbjct: 124 AIHFALQIGRTASPQVNSEQCSGCGACVSVC 154



 Score = 32.3 bits (72), Expect = 5e-06
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 49  CGLCVDVCPTNAISVF---------KFRDIICEHCGACLNVCPVDAI 86
           C  C D CP  AI            +     C  CGAC++VCP +A+
Sbjct: 113 CRSCQDACPEEAIHFALQIGRTASPQVNSEQCSGCGACVSVCPSNAM 159