Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 166 a.a., ferredoxin-type protein NapF from Dechlorosoma suillum PS

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 36/130 (27%), Positives = 49/130 (37%), Gaps = 31/130 (23%)

Query: 43  LDDCICCGLCVDVCPTNAIS--------VFKFRDIICEHCGACLNVCPVDAIEKN----- 89
           L  C  CG C+ VCPT  ++        V  FR   C  CG C + C   A+ +      
Sbjct: 36  LQQCTGCGDCIRVCPTGILTALAPGQPPVVDFRQGECTFCGQCASACRPRALRREDDRQP 95

Query: 90  --RFSVDPEKC-----IKCGVCSIFCTIPILK-------NEIPVLNVPEVTTECNNCKLC 135
               +   E C     ++C  C  FC    L+         +PVL    +   C  C  C
Sbjct: 96  WPYKATAGEACLARQQVECRSCGDFCPEGALRFPARAGGPALPVL----LEDRCTGCGAC 151

Query: 136 IQKCPQKAIS 145
           +  CP  AIS
Sbjct: 152 LAPCPTAAIS 161



 Score = 29.6 bits (65), Expect = 3e-05
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 11/52 (21%)

Query: 49  CGLCVDVCPTNAISVFKFR----------DIICEHCGACLNVCPVDAIEKNR 90
           C  C D CP  A+  F  R          +  C  CGACL  CP  AI   R
Sbjct: 114 CRSCGDFCPEGALR-FPARAGGPALPVLLEDRCTGCGACLAPCPTAAISIGR 164



 Score = 28.9 bits (63), Expect = 6e-05
 Identities = 11/20 (55%), Positives = 13/20 (65%)

Query: 44  DDCICCGLCVDVCPTNAISV 63
           D C  CG C+  CPT AIS+
Sbjct: 143 DRCTGCGACLAPCPTAAISI 162



 Score = 22.7 bits (47), Expect = 0.004
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 188 LNSCIFCKDCEEICP 202
           L  C  C DC  +CP
Sbjct: 36  LQQCTGCGDCIRVCP 50