Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 53/195 (27%)

Query: 44  DDCIC--CGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVD----PEK 97
           DDC C  CG+C ++CPT+AI                  + P+ AI K           EK
Sbjct: 28  DDCTCVGCGICSEICPTSAI-----------------EMGPLGAIFKGDIDAPKLDISEK 70

Query: 98  CIKCGVCSIFCTIPILK---NEIPVLNVPEV----------TTECNNCKLCIQKCPQKAI 144
           C+ CG+C+  C    +K   N+ P+  +P+            ++C  C+ C   CPQ AI
Sbjct: 71  CVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCAI 130

Query: 145 SFED----------GKISI-NSKCNLCLKCVEFCPLNALKSPKESLKS------KIIKVD 187
             E           G+I+I    C LC  C E+CP +A++     + +        IK+D
Sbjct: 131 DVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKID 190

Query: 188 LNSCIFCKDCEEICP 202
           L++C++CK CE+ CP
Sbjct: 191 LDACVYCKVCEKACP 205



 Score = 83.6 bits (205), Expect = 4e-21
 Identities = 64/193 (33%), Positives = 86/193 (44%), Gaps = 35/193 (18%)

Query: 34  VIGETTNPELDDCICCGLCVDVCPT----------NAISVFKFRDI-----ICEHCGACL 78
           V+GE T  + DDC+ CG+C + CP           NA+S+    DI      C +C  C 
Sbjct: 143 VLGEITIKK-DDCVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCE 201

Query: 79  NVCPVDAIEKNRFSVDPEKCIKCGVCSIFCTIPILKNEIP-VLNVPEVTTECNNCKLCIQ 137
             CP +AIE          C KC + S     P L  EI    N+ +    C +C  C  
Sbjct: 202 KACPHNAIEAI--------CYKCPLASKIKK-PELYGEIKGQTNIDKDL--CVSCGWCAN 250

Query: 138 KCPQKAISFE---DGKISINSK-CNLCLKCVEFCPLNALKSP---KESLKSKIIKVDLNS 190
            CP  AI  E   +G++ I+   CN C  C+  CP NAL  P   K+  K   + V+ + 
Sbjct: 251 ICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDV 310

Query: 191 CIFCKDCEEICPV 203
           CI C  C   CPV
Sbjct: 311 CILCGACTHSCPV 323



 Score = 66.2 bits (160), Expect = 7e-16
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 20/115 (17%)

Query: 30  KNPEVIGET---TNPELDDCICCGLCVDVCPTNAISVFK-------FRDIICEHCGACLN 79
           K PE+ GE    TN + D C+ CG C ++CP +AI V K         +  C  CGAC++
Sbjct: 223 KKPELYGEIKGQTNIDKDLCVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACIS 282

Query: 80  VCPVDAI-----EKN-----RFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPE 124
           VCP +A+     EK         V+ + CI CG C+  C +  L  +   +N+ E
Sbjct: 283 VCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDALTVKRTKINMTE 337



 Score = 27.7 bits (60), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 176 KESLKSKIIKVDLNSCIFCKDCEEICP 202
           +  ++ +++K D  +C+ C  C EICP
Sbjct: 17  RSGVEKRVLKWDDCTCVGCGICSEICP 43