Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 52 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 49.3 bits (116), Expect = 1e-11
 Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 43 LDDCICCGLCVDVCPTNAISVFKFRDI---ICEHCGACLNVCPVDAIEK 88
          LD C+ C  CV  CP  AISVF   +I   +C +C  C + CP+DAI +
Sbjct: 4  LDKCVGCAGCVPFCPVGAISVFGKAEIDMEMCTNCAVCKDYCPLDAISE 52



 Score = 38.1 bits (87), Expect = 3e-08
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 124 EVTTECNNCKLCIQKCPQKAISFEDGKISINSK-CNLCLKCVEFCPLNAL 172
           E+  +C  C  C+  CP  AIS   GK  I+ + C  C  C ++CPL+A+
Sbjct: 2   EILDKCVGCAGCVPFCPVGAISVF-GKAEIDMEMCTNCAVCKDYCPLDAI 50



 Score = 37.4 bits (85), Expect = 5e-08
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)

Query: 71  CEHCGACLNVCPVDAIEK-NRFSVDPEKCIKCGVCSIFCTI 110
           C  C  C+  CPV AI    +  +D E C  C VC  +C +
Sbjct: 7   CVGCAGCVPFCPVGAISVFGKAEIDMEMCTNCAVCKDYCPL 47



 Score = 37.0 bits (84), Expect = 6e-08
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)

Query: 96  EKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTE-CNNCKLCIQKCPQKAIS 145
           +KC+ C  C  FC +      I V    E+  E C NC +C   CP  AIS
Sbjct: 5   DKCVGCAGCVPFCPV----GAISVFGKAEIDMEMCTNCAVCKDYCPLDAIS 51



 Score = 36.6 bits (83), Expect = 8e-08
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 151 ISINSKCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPV 203
           + I  KC  C  CV FCP+ A+     S+  K  ++D+  C  C  C++ CP+
Sbjct: 1   MEILDKCVGCAGCVPFCPVGAI-----SVFGK-AEIDMEMCTNCAVCKDYCPL 47



 Score = 26.9 bits (58), Expect = 6e-05
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 42 ELDDCICCGLCVDVCPTNAIS 62
          +++ C  C +C D CP +AIS
Sbjct: 31 DMEMCTNCAVCKDYCPLDAIS 51