Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 80.5 bits (197), Expect = 2e-20
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 26/135 (19%)

Query: 89  NRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISF-- 146
           N+  ++PE CI C  C   C +  + +  P   VP++  +C  C  C++ CP  AI    
Sbjct: 29  NKIEINPELCILCNRCLEVCPVTAISSNFP--EVPDIDNKCVYCNTCVETCPVDAIKITK 86

Query: 147 -----EDGKISINS------------KCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLN 189
                E G + I +            KC +CL C + CP  A+    ++     I  D++
Sbjct: 87  TRVRVEQGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFGAISESDDN-----ISFDMD 141

Query: 190 SCIFCKDCEEICPVK 204
            C+ C  CEEICP K
Sbjct: 142 KCVLCGHCEEICPAK 156



 Score = 77.8 bits (190), Expect = 1e-19
 Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 27/169 (15%)

Query: 16  KFLKNIFFNLFRSYK-NPEVIGETT--NPELDDCICCGLCVDVCPTNAISVFKFRDI--- 69
           K LK  F NL   ++ + + I      NPEL  CI C  C++VCP  AIS   F ++   
Sbjct: 7   KILKKYFDNLDIKFELDSQYISNKIEINPEL--CILCNRCLEVCPVTAIS-SNFPEVPDI 63

Query: 70  --ICEHCGACLNVCPVDAIE--KNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEV 125
              C +C  C+  CPVDAI+  K R  V+                 I++N +    +   
Sbjct: 64  DNKCVYCNTCVETCPVDAIKITKTRVRVEQGNL-------------IIENRLKSKKLDYN 110

Query: 126 TTECNNCKLCIQKCPQKAISFEDGKISIN-SKCNLCLKCVEFCPLNALK 173
             +C  C +C + CP  AIS  D  IS +  KC LC  C E CP  A+K
Sbjct: 111 RKKCVMCLVCTKNCPFGAISESDDNISFDMDKCVLCGHCEEICPAKAIK 159



 Score = 50.8 bits (120), Expect = 1e-11
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 41  PELDD-CICCGLCVDVCPTNAISVFKFRDIICEHCGACLNVCPVDAIEKNRFSVDPEKCI 99
           P++D+ C+ C  CV+ CP +AI + K R  + +      N+   + ++  +   + +KC+
Sbjct: 61  PDIDNKCVYCNTCVETCPVDAIKITKTRVRVEQG-----NLIIENRLKSKKLDYNRKKCV 115

Query: 100 KCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFE 147
            C VC+  C    +       N+     +C  C  C + CP KAI  E
Sbjct: 116 MCLVCTKNCPFGAISESDD--NISFDMDKCVLCGHCEEICPAKAIKLE 161



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 181 SKIIKVDLNSCIFCKDCEEICPV 203
           S  I+++   CI C  C E+CPV
Sbjct: 28  SNKIEINPELCILCNRCLEVCPV 50