Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 92.0 bits (227), Expect = 8e-24
 Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 51/206 (24%)

Query: 42  ELDDCICCGLCVDVCPTNAI---SVFKFRDII---CEHCGACLNVCPVDAI--------- 86
           E + CI C LC +VCP +AI   SV    +II   C  C  C   CPV AI         
Sbjct: 44  ESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPEKCVKCEICAKTCPVGAINVLEGRAKL 103

Query: 87  EKN-------------------RFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTT 127
           E++                   +  +D E CIKCG+C  FC  P     +   N  ++  
Sbjct: 104 EEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFC--PTSAITVEKRNSIDINL 161

Query: 128 E-CNNCKLCIQKCPQKAISFE--------DGKISINSK-CNLCLKCVEFCPLNALKSPKE 177
           + C  C  C + CP+ AI  E        + +IS+N+  C  C+ C E CP+ A+     
Sbjct: 162 DLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIV---- 217

Query: 178 SLKSKIIKVDLNSCIFCKDCEEICPV 203
             +  ++K+D   CIFC  CE+ CPV
Sbjct: 218 -YEDGLMKLDDKMCIFCGKCEKNCPV 242



 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 38/147 (25%)

Query: 86  IEKNRFSVDPEKCIKCGVCSIFCTIPILKN---EIPVLNVPEVTTECNNCKLCIQKCPQK 142
           +E+N + V+  KCI+C +C   C +  +K    + P   +PE   +C  C++C + CP  
Sbjct: 37  VERNLY-VESNKCIRCELCYEVCPVDAIKEPSVKSPAEIIPE---KCVKCEICAKTCPVG 92

Query: 143 AISFEDGKISI---------------------------NSKCNLCLKCVEFCPLNALKSP 175
           AI+  +G+  +                              C  C  C  FCP +A+   
Sbjct: 93  AINVLEGRAKLEEDTVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVE 152

Query: 176 KESLKSKIIKVDLNSCIFCKDCEEICP 202
           K +     I ++L+ C+ C  CE++CP
Sbjct: 153 KRN----SIDINLDLCMGCTACEKVCP 175



 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 44  DDCICCGLCVDVCPTNAI----SVFKFRDIICEHCGACLNVCPVDAI 86
           D CI C +C ++CP  AI     + K  D +C  CG C   CPV AI
Sbjct: 199 DTCINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCGKCEKNCPVTAI 245



 Score = 29.6 bits (65), Expect = 5e-05
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 6/37 (16%)

Query: 173 KSPKESLKSKIIKVDLN------SCIFCKDCEEICPV 203
           K  KE LK  ++ V+ N       CI C+ C E+CPV
Sbjct: 24  KFVKEKLKDLMVPVERNLYVESNKCIRCELCYEVCPV 60



 Score = 27.3 bits (59), Expect = 2e-04
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)

Query: 42  ELDD--CICCGLCVDVCPTNAISV 63
           +LDD  CI CG C   CP  AI++
Sbjct: 224 KLDDKMCIFCGKCEKNCPVTAIAI 247