Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 167 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis JJ

 Score = 52.8 bits (125), Expect = 4e-12
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 12/75 (16%)

Query: 46  CICCGLCVDVCP----TNAISVF----KFRDIICEHCGA--CLNVCPVDAIEKNR--FSV 93
           C  CG CV  C      + IS++    ++  ++C+HC +  C++VCPV AIE       +
Sbjct: 11  CDNCGDCVKSCSEVHEVSGISIWEHEGRYLPVVCQHCTSSPCMDVCPVSAIESKDGVIYL 70

Query: 94  DPEKCIKCGVCSIFC 108
           D E CI CG+C++ C
Sbjct: 71  DKESCIGCGLCAMAC 85



 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 14/86 (16%)

Query: 125 VTTECNNCKLCIQKCPQK------AISFEDGKISINSKCNLCLK--CVEFCPLNALKSPK 176
           V   C+NC  C++ C +       +I   +G+  +   C  C    C++ CP++A++S  
Sbjct: 7   VNEACDNCGDCVKSCSEVHEVSGISIWEHEGRY-LPVVCQHCTSSPCMDVCPVSAIES-- 63

Query: 177 ESLKSKIIKVDLNSCIFCKDCEEICP 202
              K  +I +D  SCI C  C   CP
Sbjct: 64  ---KDGVIYLDKESCIGCGLCAMACP 86



 Score = 30.8 bits (68), Expect = 1e-05
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 44  DDCICCGLCVDVCPTNAISVFKFRDIICEHC-----GACLNVCPVDAIE 87
           + CI CGLC   CP  AI +       C+ C      AC+  C    +E
Sbjct: 73  ESCIGCGLCAMACPFGAIYISGKTAHKCDLCFGRDEQACVKACSKRCLE 121