Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 395 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 63/203 (31%), Positives = 84/203 (41%), Gaps = 45/203 (22%)

Query: 44  DDCICCGLCVDVCPTNAISVFKFRDII---------------------------CEHCGA 76
           D C+ C  C   CPT AI +  F+  I                           C+  GA
Sbjct: 9   DACLVCNACAKACPTEAIEIAPFKTCIQCFSCATACPTGALVEKDGKLVFNGSKCDLDGA 68

Query: 77  CLNVCPVDAIEK--NRFSVDPEKCIKCGVCSIFCTIPIL---------KNEIPVLNVP-E 124
           C   CPV  I+K  +RF      C+ C  C   C   I+         K EI +   P  
Sbjct: 69  CQKACPV-GIKKVDDRFPYSKGHCVLCEKCVDICPAEIISLPGKAEKPKKEIIIPQEPIA 127

Query: 125 VTTECNNCKLCIQKCPQKAISFEDGKISINSKCNLCLKCVEFCPLNAL----KSPKESLK 180
           VT +C  C +C+ +CP  AIS ED  +    KC  C  C + CP NA+    K P++  K
Sbjct: 128 VTKDCVACGVCVPECPVDAISIEDIAVIDTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQK 187

Query: 181 S-KIIKVDLNSCIFCKDCEEICP 202
           + K   V+   CI C+ C E CP
Sbjct: 188 TIKSFTVNEEECIGCEKCVEACP 210



 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 38/171 (22%)

Query: 46  CICCGLCVDVCPTNAISV--------------FKFRDIICEHCGACLNVCPVDAI----- 86
           C  CGLCV+ CP   IS+                + +  C +CG C   CP  AI     
Sbjct: 229 CPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCAIKCPTGAIKVVNP 288

Query: 87  --------EKNRFSVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVT------TECNNC 132
                   +K   + +   CI+CG C++ C    LK    V    E          CN C
Sbjct: 289 KGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEYARVEFSPALCNEC 348

Query: 133 KLCIQKCPQKAISFE-DGKISINSKCNLCLKCVEFCPLNALKSPKESLKSK 182
             C+  CPQK +    D K+ +   C +CLKC+E C     K+ KE+L  K
Sbjct: 349 GECVDVCPQKTLELTGDDKMPLKGYCVMCLKCIEACN----KTKKEALSLK 395



 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 57/203 (28%), Positives = 78/203 (38%), Gaps = 40/203 (19%)

Query: 42  ELDDCICCGLCVDVCPTNAISV--------------FKFRDIICEHCGACLNVCPVDAIE 87
           + D CI C +C   CP NAI V              F   +  C  C  C+  CP   IE
Sbjct: 156 DTDKCIYCTVCSQTCPWNAIFVAGKLPQKRQKTIKSFTVNEEECIGCEKCVEACPGSMIE 215

Query: 88  KNRFSVD---PEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTE--------CNNCKLCI 136
            N  ++    P  C  CG+C   C + ++  E+   +   VT E        C  C  C 
Sbjct: 216 YNGEALGVKLPGACPACGLCVESCPVEVISLEVEYASAKPVTDEGLVWSEEKCAYCGPCA 275

Query: 137 QKCPQKAISFEDGK-ISINSK-----------CNLCLKCVEFCPLNALKSPK---ESLKS 181
            KCP  AI   + K + + SK           C  C  C   CP  ALK  K   E  + 
Sbjct: 276 IKCPTGAIKVVNPKGLELPSKKKTEKANEFAMCIRCGACAMKCPTGALKMGKMVHEGKEY 335

Query: 182 KIIKVDLNSCIFCKDCEEICPVK 204
             ++     C  C +C ++CP K
Sbjct: 336 ARVEFSPALCNECGECVDVCPQK 358



 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 15/114 (13%)

Query: 92  SVDPEKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTECNNCKLCIQKCPQKAISFEDGKI 151
           S+  + C+ C  C+  C  P    EI           C  C  C   CP  A+  +DGK+
Sbjct: 5   SIQEDACLVCNACAKAC--PTEAIEIAPFKT------CIQCFSCATACPTGALVEKDGKL 56

Query: 152 SIN-SKCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEEICPVK 204
             N SKC+L   C + CP+   K       SK        C+ C+ C +ICP +
Sbjct: 57  VFNGSKCDLDGACQKACPVGIKKVDDRFPYSK------GHCVLCEKCVDICPAE 104



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query: 184 IKVDLNSCIFCKDCEEICPVK 204
           I +  ++C+ C  C + CP +
Sbjct: 4   ISIQEDACLVCNACAKACPTE 24