Pairwise Alignments

Query, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., iron-sulfur cluster-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.6 bits (122), Expect = 8e-12
 Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 36  GETTNPELDDCICC--GLCVDVCPTNAISVFKFRDI-----ICEHCGACLNVCPVDAIEK 88
           G +T  E   C+ C    C   CPT A +  K   +     +C  CG C   CPVDA+  
Sbjct: 36  GLSTGFEARLCLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHM 95

Query: 89  NRFSVDPEKCIKCGVCSIFC 108
           +  +  P  CI CG C  FC
Sbjct: 96  DGETGLPYVCIHCGRCVAFC 115



 Score = 42.7 bits (99), Expect = 4e-09
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 46  CICCGLCVDVCPTNAISVFKFRDI--ICEHCGACLNVCPVDAIE 87
           CI CG C + CP +A+ +     +  +C HCG C+  CP + IE
Sbjct: 78  CIRCGRCAEACPVDAVHMDGETGLPYVCIHCGRCVAFCPHECIE 121



 Score = 39.7 bits (91), Expect = 3e-08
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 24/123 (19%)

Query: 96  EKCIKCGVCSIFCTIPILKNEIPVLNVPEVTTE-----------CNNCKL--CIQKCPQK 142
           E+CI C  CS+ C   + K    V     +T+            C  C    C Q CP  
Sbjct: 2   ERCIGCHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTG 61

Query: 143 AISFEDG---KISINSKCNLCLKCVEFCPLNALKSPKESLKSKIIKVDLNSCIFCKDCEE 199
           A +   G   K+   S C  C +C E CP++A+    E+    +       CI C  C  
Sbjct: 62  AYAQRKGGGVKVD-RSLCIRCGRCAEACPVDAVHMDGETGLPYV-------CIHCGRCVA 113

Query: 200 ICP 202
            CP
Sbjct: 114 FCP 116



 Score = 38.1 bits (87), Expect = 9e-08
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 17/88 (19%)

Query: 129 CNNCKLCIQKCPQKAISFEDGKISINS--------KCNLCLKC-----VEFCPLNALKSP 175
           C+ C L   +   K +S+    I I S        +  LCL C      + CP  A    
Sbjct: 7   CHACSLACARLVHKRLSWVTAGIRITSAGGLSTGFEARLCLACDPAPCAQACPTGAYAQR 66

Query: 176 KESLKSKIIKVDLNSCIFCKDCEEICPV 203
           K       +KVD + CI C  C E CPV
Sbjct: 67  KGGG----VKVDRSLCIRCGRCAEACPV 90



 Score = 38.1 bits (87), Expect = 9e-08
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 66  FRDIICEHC--GACLNVCPVDAIEKNR---FSVDPEKCIKCGVCSIFCTIPILKNEIPVL 120
           F   +C  C    C   CP  A  + +     VD   CI+CG C+  C +  +  +    
Sbjct: 41  FEARLCLACDPAPCAQACPTGAYAQRKGGGVKVDRSLCIRCGRCAEACPVDAVHMD-GET 99

Query: 121 NVPEVTTECNNCKLCIQKCPQKAISFEDGKIS 152
            +P V   C +C  C+  CP + I   D  ++
Sbjct: 100 GLPYV---CIHCGRCVAFCPHECIELVDQPVA 128



 Score = 26.2 bits (56), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 2/28 (7%)

Query: 36  GETTNPELDDCICCGLCVDVCPTNAISV 63
           GET  P +  CI CG CV  CP   I +
Sbjct: 97  GETGLPYV--CIHCGRCVAFCPHECIEL 122