Pairwise Alignments

Query, 392 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 587 a.a., transporter, CPA2 family from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (281), Expect = 2e-29
 Identities = 93/395 (23%), Positives = 181/395 (45%), Gaps = 34/395 (8%)

Query: 2   DISWVLFTIGIAIIFGKLGDHLMNKLGFPGVLGEMIMGMILGNLVYFGLVSPDHLTIQNN 61
           D++ ++   G+  I       L ++L  P VLG ++ G I+G        +P    I + 
Sbjct: 9   DLAVIMLVAGVVTI-------LFHRLRQPVVLGYIVAGFIIGPH------TPPFSLIHDE 55

Query: 62  EIFDFLSRLGIIFLLFLGGLDTDLSVLKKTGKIATVSTVFGVLVPLVMGYLALQYMGYTA 121
           E    L+ LG+IFL+F  GL+  L  L K G  A ++    + + + +GY   Q+ G+  
Sbjct: 56  ETIKILAELGVIFLMFCLGLEFSLRKLFKVGATAFIAAFLEIALMIWIGYEIGQFFGWKT 115

Query: 122 AESFAGGVVLTATSIGITVRVMMDMGVLKSEVGAASLSASIMDDFLGIMLIIF------- 174
            +S   G +L  +S  I V+ + D+ +             I++D LGI +I         
Sbjct: 116 MDSLFLGAILAISSTTIIVKALNDLKMKNQRFAQLIFGVLIVEDILGIGIIALLSGIAVS 175

Query: 175 -AVGTGSILGLLGKFAIFFIITGFLAMKLVNKFISFSEKLHVEKGILSLAIAVMFLFSFL 233
            +V +G +   +GK ++F I+   + + +V + +S+  +    + +L   + + F F  L
Sbjct: 176 GSVSSGEVFSTVGKLSLFMIVALVIGILVVPRLLSYVARFESNEMLLITVLGLCFGFCLL 235

Query: 234 AENWFEAAIEGSFMAGLVLSRTAE---GKNLIEDVKTIGYSILIPLFFVYTGASLNLTIF 290
                 + + G+F+ G +++ + E    + LIE V+     +   +FFV  G  ++  I 
Sbjct: 236 VVKLEYSMVLGAFLIGAIMAESRELLKIERLIEPVR----DMFSAIFFVAIGLLIDPGIL 291

Query: 291 GDFDALYLALVLTAIAIVSKVVGRGFGARIMGWNMKKSLQMGIGSIPRAEIALINLMVAI 350
             +   +   V+T   ++ K++  G GA I G + + SL++G+G     E + I   + +
Sbjct: 292 LQY--AWPIAVITVAVVLGKMLSCGLGAFIAGNDGRTSLRVGMGLSQIGEFSFIIAALGM 349

Query: 351 HAGVISESNVGKFIAATMIFITISIISTPPLLKWA 385
              V S+      +A +     I+ + TP L++ A
Sbjct: 350 TLQVTSDFLYPVAVAVS----AITTLLTPYLIRGA 380