Pairwise Alignments

Query, 392 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 460 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  167 bits (422), Expect = 7e-46
 Identities = 124/425 (29%), Positives = 203/425 (47%), Gaps = 49/425 (11%)

Query: 6   VLFTIGIAIIFGKLGDHLMNKLGFPGVLGEMIMGMILGNLVYFGLVSPDH---------- 55
           VL  + +  +  KLG  L  ++  P VLGE++ G+++G  V   LV P            
Sbjct: 35  VLLGLVVVYLASKLGGELCVRVNLPPVLGELLGGVLVGTSVLRLLVFPSSGAGAEDVVLL 94

Query: 56  ----------------LTIQNNEIFDFLSRLGIIFLLFLGGLDTDLSVLKKTGKIATVST 99
                           +    +E+   LS +G+I LLF  GL+++L  L K G  A +  
Sbjct: 95  NFLQQISGAPDNWMPTIFATQSEVISVLSEIGVIILLFEIGLESNLDELLKVGTKAAIVA 154

Query: 100 VFGVLVPLVMGYLALQYMGYTAA-ESFAGGVVLTATSIGITVRVMMDMGVLKSEVGAASL 158
           V GV  P   G L L Y+ + A   +   G  LTATSIGIT +V+ ++G L S  G   +
Sbjct: 155 VVGVAAPFAAGTLGLIYLFHIATIPAVFAGAALTATSIGITAKVLSELGRLNSPEGQIII 214

Query: 159 SASIMDDFLGIMLIIFA--------VGTGSILGLLGKFAIFFIITGFLAMKLVNKFISFS 210
            A+I+DD LGI+++           +   +I+ L+     F +   F+   L   F++  
Sbjct: 215 GAAIIDDILGIIVLAVVSSLAKTGEIRPSNIVILIVSSTAFLVGAIFIGRWLNPFFVNLV 274

Query: 211 EKLHVEKGILSLAIAVMFLFSFLAENWFEAAIEGSFMAGLVLSRTAEGKNLIEDVKTIGY 270
             +     +L +A+    L   +A+     AI G+F  GL+L+ T +G+ L E VK +  
Sbjct: 275 SSMQTRGEVLVVALVAAILAGLIAQFVRLEAILGAFAVGLILAETEKGEELKEQVKPLA- 333

Query: 271 SILIPLFFVYTGASLNLTIFGDFD-----ALYLALVLTAIAIVSKVVGRGFGARIMGWNM 325
            +L+P+FFV  GA  +L++    D      L +A  L  +A++ KV+    G  ++G + 
Sbjct: 334 DVLVPIFFVVVGAKTDLSVLNPADPVNRAGLIIAGFLLVVAVLGKVI---TGFSLVGSST 390

Query: 326 K-KSLQMGIGSIPRAEIALINLMVAIHAGVISESNVGKFIAATMIFITISIISTPPLLKW 384
               L +G+G IPR E+ L+   V   +G++SES      A  ++ + ++    PPLL+ 
Sbjct: 391 PLNRLAIGVGMIPRGEVGLVFAGVGASSGILSES----LNAGVIVMVIMTTFLAPPLLRL 446

Query: 385 AFTEE 389
           AF  E
Sbjct: 447 AFRGE 451