Pairwise Alignments

Query, 392 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 397 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  142 bits (357), Expect = 2e-38
 Identities = 115/419 (27%), Positives = 202/419 (48%), Gaps = 54/419 (12%)

Query: 1   MDISWVLFTIGIAIIFGKLGDHLMNKLGFPGVLGEMIMGMILGNLVYFGLVSPDHLTIQN 60
           M I   + ++ + ++FG++      +L  P V+GE++ G+++G  +  G ++P       
Sbjct: 1   MAIDNFVLSLCLILLFGRVLGEAFKRLQLPAVVGEILAGILIGPSL-LGWIAP------- 52

Query: 61  NEIFDFLSRLGIIFLLFLGGLDTDLSVLKKTGKIATVSTVFGVLVP-LVMGYLALQYMGY 119
           +E    ++ LG+I LLF  G +T +  L + G  A    + G+ +P +V+G + L Y+  
Sbjct: 53  HETLAVMAELGVILLLFSIGCETSIKHLFQAGNSAAGVALLGIALPAVVIGLVCLLYLDL 112

Query: 120 TAAESFAGGVVLTATSIGITVRVMMDMGVLKSEVGAASLSASIMDDFLGIML--IIFAVG 177
               +   G  LTATSIGI+VRVM      +S+ G   L A+++DD  G++L  ++F   
Sbjct: 113 PGFTALYLGCALTATSIGISVRVMAQAKQSQSQEGHIILGAAVIDDIAGVILLSLLFNFA 172

Query: 178 TGSILGLLGKFAIFFIITGFLAM-----KLVNKFISFSEKLHVEKGILSLAIAVMF-LFS 231
           +   +GL+    +   I GFL +     +L+       +    E G  ++   ++  LF+
Sbjct: 173 SSGEVGLIPSGLLILKIVGFLLLAPPMARLLLYLFRAVKPKEEETGYEAIVTMILICLFA 232

Query: 232 FLAENWFEAAIEGSFMAGLVLSR--------------------TAEGKNLIEDVKTIGYS 271
           +LA      A+ G F  GL LSR                      E K L++        
Sbjct: 233 WLAHALHAPALLGGFAVGLALSRQFISPLNRYLQNPFAFTHEMEVESKPLVD-------- 284

Query: 272 ILIPLFFVYTGASLNLT-IFGDFDALYLALVLTAIAIVSKVVGRGFGARIMGWNMKKSLQ 330
           I  P+FFVY G SL+L+ I   +  L   L+L+ +AI++K++    G R+ G    K++ 
Sbjct: 285 IFAPIFFVYVGISLDLSQIDLGWSGLLTLLMLSLLAIITKMMA---GLRVPGHLRTKAI- 340

Query: 331 MGIGSIPRAEIALINLMVAIHAGVISESNVGKFIAATMIFITISIISTPPLLKWAFTEE 389
           +G   +PR E+ L+   + +  G+IS     K     ++ I I+ I+ P LLKW   ++
Sbjct: 341 VGSAMVPRGEVGLVFAEMGLQMGIISP----KLFTELVLIIAITTIAGPLLLKWTLAKD 395