Pairwise Alignments

Query, 383 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 420 a.a., Tetracycline-efflux transporter from Xanthomonas campestris pv. campestris strain 8004

 Score =  110 bits (274), Expect = 9e-29
 Identities = 89/356 (25%), Positives = 164/356 (46%), Gaps = 16/356 (4%)

Query: 11  LWITIFVTMLGIGLISPLLAIFAKSYGLSNFQ-----IGLIFGSFALVRTIFQLPAGTLS 65
           ++IT+ + +L  G+I P+L    + +   ++      IG     FA ++ +     GTLS
Sbjct: 23  IFITVLIDVLSFGVIIPVLPDLVRQFTGGDYAAAAGWIGWFGFLFAAIQFVCSPLQGTLS 82

Query: 66  DSYGKKVFLVGGTLLYGVTTLFYGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTSPK 125
           D YG++  ++   L  G+  +    A     +L+ R  +GV SA  +  A +YIA  +P 
Sbjct: 83  DRYGRRPVILLSCLGLGLDFILMALAHTLPMLLLARVISGVCSASFS-TANAYIADVTPA 141

Query: 126 SKLGEYMGLFNSAISLGFGVGPLLGGLLADMYGFMVPFYVGGLLGIIASIIAYFKL-EDT 184
            K     G+  +A  +GF  GPL+GG L  + G   PF+    L ++  +  +F L E  
Sbjct: 142 DKRAGAFGMLGAAFGIGFVAGPLIGGWLGSI-GLRWPFWFAAGLALLNVLYGWFVLPESL 200

Query: 185 PKTQEKQKLSWKNLFSLEFLK-MRNFSAAFIINIALTISRGAILAYLAIY----AYDYGV 239
           P  +   +L W +      LK +R +   F +   + ++  A   Y +I+    +Y Y  
Sbjct: 201 PPERRTARLDWSHANPFGALKLLRRYPQVFGLASVVFLANLAHYVYPSIFVLFASYQYHW 260

Query: 240 SAFKIGVMLAAMNLV-LAVTQKMFGRIFDEKG-NRIILHGIIIGNLGMFILAMSTSFTTM 297
              ++  +LA + +  + V   + GRI    G  R +L G+  G +G  I  ++ S  T 
Sbjct: 261 GPREVSWVLAGVGVCSIIVNAVLVGRIVRWLGERRALLLGLGCGVIGFVIYGLADSGHTF 320

Query: 298 FISLIISSIGASMSTPGINSIAIRDIPDKRQGEAMGLYTASINVGIFFGAVLLGYI 353
            + + IS+  A ++ P   ++  R++    QG   G  T+ +++G   G +L   +
Sbjct: 321 LLGVPISAFWA-VAAPAAQALITREVGADAQGRVQGALTSLVSLGGIAGPLLFANV 375