Pairwise Alignments

Query, 383 a.a., MFS transporter from Methanococcus maripaludis S2

Subject, 402 a.a., Predicted arabinose efflux permease, MFS family from Paraburkholderia bryophila 376MFSha3.1

 Score = 80.9 bits (198), Expect = 6e-20
 Identities = 75/370 (20%), Positives = 160/370 (43%), Gaps = 9/370 (2%)

Query: 6   KGIYVLWITIFVTMLGIGLISPLLAIFAK-SYGLSNFQIGLIFGSFALVRTIFQLPAGTL 64
           + ++VL        +   ++  LL +F   S G S   IGLI G       I ++ +G L
Sbjct: 15  RSVWVLGCVSLCMDISSEIVHSLLPMFLTVSLGASAATIGLIEGIAEATAPIVKVFSGAL 74

Query: 65  SDSYGKKVFL-VGGTLLYGVTTLFYGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTS 123
           SD  G + +L V G  L  ++   +  A     ++  R    V          + +A  +
Sbjct: 75  SDYLGNRKWLAVAGYALGALSKPLFAIAPTVGVVVSARVIDRVGKGIRGAPRDALVADVT 134

Query: 124 PKSKLGEYMGLFNSAISLGFGVGPLLGGLLADMYG--FMVPFYVGGLLGIIASIIAYFKL 181
           P    G   GL  S  ++G  +GPL   ++  ++   F + F++  + G++A  +    +
Sbjct: 135 PVHLRGAAFGLRQSLDTIGAVLGPLFAVVIMSVWADNFRLAFWLAVIPGVLAVALLMVGI 194

Query: 182 EDTPKTQEKQKLSWKNLFSLEFLKMRNFSAAFIINIALTISRGAIL-AYLAIYAYDYGVS 240
            +  +    +++   N   LE LK       +++ I    +      A+L + A   GV 
Sbjct: 195 HEPAREAGAKRV---NPVRLENLKKLGARYWWVVAIGAVFALARFSEAFLVLRAMGSGVP 251

Query: 241 AFKIGVMLAAMNLVLAVTQKMFGRIFDEKGN-RIILHGIIIGNLGMFILAMSTSFTTMFI 299
              + +++  MN+V +++   FG++ D   + R+++ G+++      +LA  + ++ + +
Sbjct: 252 IALVPLVMVTMNIVYSLSAYPFGKLADTMNHKRLLIAGVVVLIASDLVLAHGSHWSIVLL 311

Query: 300 SLIISSIGASMSTPGINSIAIRDIPDKRQGEAMGLYTASINVGIFFGAVLLGYISDIVGI 359
            + +  +   M+   + ++     P + +G A G +     V     +V+ G + D +G 
Sbjct: 312 GVALWGLHMGMTQGLLATMVSHTAPAQLRGTAFGFFNLLGGVVTLLSSVIAGELWDKIGA 371

Query: 360 SNMYKIGAVF 369
           +  +  GAVF
Sbjct: 372 TATFYAGAVF 381



 Score = 45.1 bits (105), Expect = 4e-09
 Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 2/178 (1%)

Query: 12  WITIFVTMLGIGLISP-LLAIFAKSYGLSNFQIGLIFGSFALVRTIFQLPAGTLSDSYGK 70
           W+     +  +   S   L + A   G+    + L+  +  +V ++   P G L+D+   
Sbjct: 223 WVVAIGAVFALARFSEAFLVLRAMGSGVPIALVPLVMVTMNIVYSLSAYPFGKLADTMNH 282

Query: 71  KVFLVGGTLLYGVTTLFYGFASGFASILIVRTFTGVFSAFVNPVAGSYIAQTSPKSKLGE 130
           K  L+ G ++   + L     S ++ +L+     G+       +  + ++ T+P    G 
Sbjct: 283 KRLLIAGVVVLIASDLVLAHGSHWSIVLLGVALWGLHMGMTQGLLATMVSHTAPAQLRGT 342

Query: 131 YMGLFNSAISLGFGVGPLLGGLLADMYGFMVPFYVGGLLGIIA-SIIAYFKLEDTPKT 187
             G FN    +   +  ++ G L D  G    FY G +  +   +++   K  DT  T
Sbjct: 343 AFGFFNLLGGVVTLLSSVIAGELWDKIGATATFYAGAVFCVATIALLVAGKAPDTRAT 400