Pairwise Alignments

Query, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 335 a.a., Electron transport complex protein RnfB from Pseudomonas fluorescens FW300-N1B4

 Score = 46.6 bits (109), Expect = 2e-10
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query: 5   VNEDECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECIK 56
           + E ECI C  C+  CPV AI   A     +   +C  C  C   CPV+CI+
Sbjct: 76  IREAECIGCTKCIQACPVDAIVGAAKFMHTVIVDECTGCDLCVAPCPVDCIE 127



 Score = 28.1 bits (61), Expect = 6e-05
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 2   VYKVNEDECIACGACVPVCPVQAI 25
           ++ V  DEC  C  CV  CPV  I
Sbjct: 103 MHTVIVDECTGCDLCVAPCPVDCI 126



 Score = 24.6 bits (52), Expect = 6e-04
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 17 VPVCPVQAISENADGK-AVIDCAKCNDCGDCSDVCPVECI 55
          VPV  +     +A  + A I  A+C  C  C   CPV+ I
Sbjct: 57 VPVLELDVSRGSAPAQIAYIREAECIGCTKCIQACPVDAI 96