Pairwise Alignments

Query, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 205 a.a., 4Fe-4S binding protein from Methanococcus maripaludis JJ

 Score = 50.8 bits (120), Expect = 5e-12
 Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 3/57 (5%)

Query: 2   VYKVNEDECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECIKQE 58
           V+K  +  C  CGAC+ VCPV AI +N   +  +D  KC  CG CS  C +  +K E
Sbjct: 63  VFKFRDIICEHCGACLNVCPVDAIEKN---RFSVDSEKCIKCGVCSIFCTIPILKNE 116



 Score = 48.5 bits (114), Expect = 3e-11
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 14/66 (21%)

Query: 8   DECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECIKQEK-------- 59
           ++CI CG CV VCP  AIS       +     C  CG C +VCPV+ I++ +        
Sbjct: 44  EDCICCGLCVDVCPTNAISVFKFRDII-----CEHCGACLNVCPVDAIEKNRFSVDSEKC 98

Query: 60  -TCGCC 64
             CG C
Sbjct: 99  IKCGVC 104



 Score = 43.5 bits (101), Expect = 8e-10
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 8   DECIACGACVPVCPVQAISENADGKAVIDCAKCNDCGDCSDVCPVECIKQEK 59
           +EC  C  C+  CP +AIS   DGK  I+ +KCN C  C + CP+  +K  K
Sbjct: 127 NECNNCKLCIQKCPQKAISFE-DGKISIN-SKCNLCLKCVEFCPLNALKSPK 176



 Score = 37.4 bits (85), Expect = 6e-08
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 9   ECIACGACVPVCPVQAISENADG---KAV-IDCAKCNDCGDCSDVCPVE 53
           +C  C  CV  CP+ A+    D    K + +D   C  C DC ++CPV+
Sbjct: 156 KCNLCLKCVEFCPLNALKSPKDSLKSKIIKVDLNSCIFCKDCEEICPVK 204



 Score = 26.2 bits (56), Expect = 1e-04
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 2   VYKVNEDECIACGACVPVCPVQ 23
           + KV+ + CI C  C  +CPV+
Sbjct: 183 IIKVDLNSCIFCKDCEEICPVK 204