Pairwise Alignments

Query, 65 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 400 a.a., F420H2:quinone oxidoreductase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 45.1 bits (105), Expect = 5e-10
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 1  MVYKVNEDECIACGACVPVCPVQAISENADGKAV----IDCAKCNDCGDCSDVCP 51
          M+   ++  C  C ACV  CP+Q I    D +      +D A+C DCG C   CP
Sbjct: 1  MIKVEDKSRCCGCEACVSSCPLQCIELVKDKEGFMYPQVDTARCIDCGKCEKACP 55



 Score = 26.2 bits (56), Expect = 2e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 34 VIDCAKCNDCGDCSDVCPVECIKQEK 59
          V D ++C  C  C   CP++CI+  K
Sbjct: 4  VEDKSRCCGCEACVSSCPLQCIELVK 29



 Score = 25.4 bits (54), Expect = 4e-04
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 1  MVYKVNEDECIACGACVPVCPVQAISENADGKAV 34
          M  +V+   CI CG C   CP    ++ + G  V
Sbjct: 35 MYPQVDTARCIDCGKCEKACPELVEAKGSGGVTV 68