Pairwise Alignments

Query, 359 a.a., Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain from Methanococcus maripaludis S2

Subject, 387 a.a., Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain from Methanococcus maripaludis JJ

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 30/233 (12%)

Query: 116 QSGGVVTAILANAFDEDLIDGAIVMMEDKWTMDPKSYLATSKEDVLKTAGSRY----NWN 171
           + GG VTA+     D+ ++DG + + +     D      TS ED+L TAGS +     W 
Sbjct: 20  ECGGAVTALFKYLLDKGIVDGVLALKKGVDVYDAIPTFVTSSEDLLSTAGSLHCAPTMWG 79

Query: 172 VPILEVLKEAVMVKKLNKIAVVGTPCVINAVYQM---MATNNDLVEPFKKAIRLKISLFC 228
             I E L++A       KIAV   PC + A+ ++      N D V          I L C
Sbjct: 80  GIIKEYLQDA-------KIAVPVKPCDMRAIVELAKRAQINLDNV--------YMIGLNC 124

Query: 229 FETFDYDKMLKKLK-EVEVNPWDIKKMEIDKGKLIVSTIHGNVFNFKIDEMDE--YVRK- 284
             T      ++ +K   EV+P D+ K EIDKGK I+    G     K+ ++++  Y R+ 
Sbjct: 125 GGTVPPKTAMEMIKLFYEVDPKDVVKEEIDKGKFIIVMKDGTHKEVKMHDLEDNGYGRRV 184

Query: 285 GCKVCRDFTGISSDISVGN---VGTPEG-YSTVLVRNKWGKGFFDRAVINGYV 333
            C+ C +     +DI+ GN   +G   G Y+ + V  + GK   + A  +GY+
Sbjct: 185 NCQRCDEKIPRKADIAAGNWGVIGEDAGKYTFMEVCTEKGKQLLESAEKDGYI 237



 Score = 28.9 bits (63), Expect = 2e-04
 Identities = 22/82 (26%), Positives = 29/82 (35%), Gaps = 20/82 (24%)

Query: 10  EVWDKE--TCSGCGACVSVCPTENIYFKQQSPVQFDCDECACIIVPTENGESPIS----- 62
           E W+++   C  C  C  VCP           V F C +CA      + G  P       
Sbjct: 277 EEWNRQWNKCIKCYGCRDVCP-----------VCF-CRDCALTADYVDTGSIPPDPIMFQ 324

Query: 63  -AEFCKVTLYDVNCGACYNACP 83
                 +    VNCG C + CP
Sbjct: 325 GVRMSHMAFSCVNCGQCEDVCP 346



 Score = 25.0 bits (53), Expect = 0.003
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 16  TCSGCGACVSVCPTE 30
           +C  CG C  VCP E
Sbjct: 334 SCVNCGQCEDVCPME 348