Pairwise Alignments

Query, 256 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 312 a.a., hypothetical protein from Methanococcus maripaludis JJ

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)

Query: 20  IHEVLDENKDLEKLVLENVL--GQRFIGNGVSRKDL--------TIIVNGVPGGDLGMFM 69
           I E+++ N   EK++  NV    +  + + V R  +         I VNG      G+ M
Sbjct: 156 ITELMESNSQ-EKVLKPNVFKNNELILNDNVIRDTIGARLENGSKITVNGNVDLSTGILM 214

Query: 70  KGPKVVVNGNADHAPGNTMDEGFVVIHGSSGDVTGHSMRGGKVYVQGNVGYRSGIHMKE 128
           K   V+VNGNA    G+ +  G V+I G++GD T   M  G + + GN G   G   K+
Sbjct: 215 KNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDGNAGKFLGSKKKK 273



 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 22/78 (28%), Positives = 40/78 (51%)

Query: 38  VLGQRFIGNGVSRKDLTIIVNGVPGGDLGMFMKGPKVVVNGNADHAPGNTMDEGFVVIHG 97
           V G   +  G+  K+ T++VNG  G + G  ++G  V++ GN      + M  G ++I G
Sbjct: 202 VNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDG 261

Query: 98  SSGDVTGHSMRGGKVYVQ 115
           ++G   G   + G +Y +
Sbjct: 262 NAGKFLGSKKKKGVIYAK 279