Pairwise Alignments

Query, 256 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 251 a.a., glutamate synthase, large subunit (VIMSS_AUTO) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  209 bits (533), Expect = 3e-59
 Identities = 113/247 (45%), Positives = 153/247 (61%), Gaps = 7/247 (2%)

Query: 6   IDAKDMDYRELNEKIHEVLDENKDLEKLVLENVLGQRFIGNGVSRKDLTIIVNGVPGGDL 65
           IDA  M YRELN +I E +     +  + L  V GQRFIGN V   D++I + GVPG DL
Sbjct: 7   IDADGMPYRELNVRIREAVAAGTQV--IDLHGVRGQRFIGNAVEG-DVSINILGVPGQDL 63

Query: 66  GMFMKGPKVVVNGNADHAPGNTMDEGFVVIHGSSGDVTGHSMRGGKVYVQGNVGYRSGIH 125
           G FM+GP + V GNA    GNTMD G +VI G +GDV G++MR G + V+G+VGYR GIH
Sbjct: 64  GAFMRGPHIRVQGNAQDGVGNTMDGGHIVIDGMAGDVLGYAMRDGSILVRGDVGYRVGIH 123

Query: 126 MKEYKYKFPVLVIGGAAKDFLGEYMAGGIILNLNMDQEDSE-NIEGRMIATGIHGGVIYV 184
           MK Y  + PV+V+GG A DFLGEYMAGG+I+ L MD    E  + GR + TG+HGGVIY+
Sbjct: 124 MKSYLDRVPVIVVGGKAGDFLGEYMAGGVIVLLGMDTGKPEAPVAGRSLGTGMHGGVIYI 183

Query: 185 RGIVKSSQLGIAADIKEFTEEDVEKITPYIEEFCAEFGYSNEIKEKLINSKYTKIAPISS 244
           RG V    LG    +    EED   +  +++ +   FG   +   +++ + + K+ P S 
Sbjct: 184 RGEVPEHLLGPGLALSPLDEEDGAALARHVQAYADAFG---KDAAEILGASFVKVHPRSH 240

Query: 245 RPFQKLY 251
           RP+  +Y
Sbjct: 241 RPYGNMY 247