Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1482 a.a., Glutamate synthase domain 2 from Pseudomonas stutzeri RCH2

 Score =  213 bits (542), Expect = 4e-59
 Identities = 128/309 (41%), Positives = 167/309 (54%), Gaps = 3/309 (0%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYS-DNVITQVASGRFGVNSEYL 241
            +S GALS  AH+A+A A+   G    +GEGG     YG    + I QVA+GRFGV  EYL
Sbjct: 863  ISLGALSPEAHEAIAAAMNRIGARSNSGEGGEDPARYGTERSSKIKQVATGRFGVTPEYL 922

Query: 242  NKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQ 301
                 ++IK+ QGAKPG GG LPG KV+  ++  R    G   ISP PHHDIYSIEDLAQ
Sbjct: 923  VNAEVLQIKVAQGAKPGEGGQLPGGKVNGLIARLRYAVPGVTLISPPPHHDIYSIEDLAQ 982

Query: 302  LIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNV 361
            LI  LK+     + V VK+ A   V  IA G+A + AD + I G+ GGTGA+P       
Sbjct: 983  LIFDLKQVNPQAL-VSVKLVAEPGVGTIAAGVAKAYADLITISGYDGGTGASPLTSIRYA 1041

Query: 362  GIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMG 421
            G P E+ +A     LR    R K+ +   GG++   DV K+  LGA++   GTA M+A+G
Sbjct: 1042 GSPWELGLAETHQTLRGNDLRGKVRVQTDGGLKTGLDVIKAAILGAESFGFGTAPMIALG 1101

Query: 422  CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIE 481
            C     C+   CA G+ATQ  +L K   +      V N       E +E L   G+ S+ 
Sbjct: 1102 CKYLRICHLNNCATGVATQNEQLRKDHFI-GTVDMVVNFFQFVAEETREWLAKLGVRSLG 1160

Query: 482  SLRGNRDRL 490
             L G  D L
Sbjct: 1161 ELIGRTDLL 1169



 Score = 28.9 bits (63), Expect = 0.001
 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKKPEKLE 146
           QVTNP IDPLRE   M L T +G +    E
Sbjct: 513 QVTNPPIDPLREAIVMSLETCLGAERNVFE 542