Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  222 bits (566), Expect = 6e-62
 Identities = 132/312 (42%), Positives = 168/312 (53%), Gaps = 3/312 (0%)

Query: 183  MSYGALSLNAHKAMAKAVKECGTFMGTGEGGLHRDLYGYSDNV-ITQVASGRFGVNSEYL 241
            MS GALS  AH+A+A A+   G +  +GEGG     +G   N  I QVASGRFGV   YL
Sbjct: 864  MSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRFGTERNSRIKQVASGRFGVTPHYL 923

Query: 242  NKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIYSIEDLAQ 301
                 ++IK+ QGAKPG GG LPG KV+AE++  R    G   ISP PHHDIYSIEDLAQ
Sbjct: 924  TNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSVPGVTLISPPPHHDIYSIEDLAQ 983

Query: 302  LIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAPKVFRDNV 361
            LI  LK+    K  V VK+ +   V  IA G+A + AD + I G+ GGT A+P       
Sbjct: 984  LIFDLKQINP-KALVSVKLVSEPGVGTIATGVAKAYADLITISGYDGGTAASPLTSVKYA 1042

Query: 362  GIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGTAAMVAMG 421
            G P E+ +A     L   G RHKI +   GG++   DV K   LGA++   GTA MVAMG
Sbjct: 1043 GSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVIKGAILGAESFGFGTAPMVAMG 1102

Query: 422  CTVCGRCYTGQCAWGIATQKPELVKRLEVDDAARRVANLIHAWTHEIQELLGAAGINSIE 481
            C     C+   CA G+ATQ  E +++         V N       E++  L   G+  + 
Sbjct: 1103 CKFLRICHLNNCATGVATQ-DETLRKDYFKGLPEMVMNYFKGLAEEVRGYLAELGVEKLT 1161

Query: 482  SLRGNRDRLRGV 493
             L G  D L  V
Sbjct: 1162 DLIGRTDLLEVV 1173



 Score = 29.6 bits (65), Expect = 8e-04
 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 2/25 (8%)

Query: 119 QVTNPSIDPLREP--MELRTYVGKK 141
           QVTNP IDPLRE   M L T +G++
Sbjct: 513 QVTNPPIDPLREKHVMSLATSIGQE 537