Pairwise Alignments

Query, 510 a.a., alpha-hydroxy-acid oxidizing protein from Methanococcus maripaludis S2

Subject, 1530 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  209 bits (532), Expect = 6e-58
 Identities = 128/319 (40%), Positives = 176/319 (55%), Gaps = 13/319 (4%)

Query: 181  GHMSYGALSLNAHKAMAKAVKECGTFMGTGEGG---LHRDLYGYSDN---VITQVASGRF 234
            G MS+G++S  AH  +A A+   G    +GEGG   +  +L    D+    I QVASGRF
Sbjct: 903  GAMSFGSISYEAHSTLAIAMNRLGAKSNSGEGGEDPMRFELNANGDSERSAIKQVASGRF 962

Query: 235  GVNSEYLNKGAAIEIKIGQGAKPGIGGHLPGEKVSAEVSMTRMIPQGSDAISPAPHHDIY 294
            GV S YL     I+IK+ QGAKPG GG LPG+KV   +  TR    G   ISP PHHDIY
Sbjct: 963  GVTSYYLTNADEIQIKMAQGAKPGEGGQLPGDKVDEWIGATRHSTPGVGLISPPPHHDIY 1022

Query: 295  SIEDLAQLIRSLKEATRWKMPVFVKISAVHNVSAIANGIATSDADAVVIDGFKGGTGAAP 354
            SIEDLAQLI  LK A R K  V VK+ +   V  IA+G+A + AD V+I G  GGTGA+P
Sbjct: 1023 SIEDLAQLIFDLKNANR-KGRVNVKLVSEAGVGTIASGVAKAKADVVLIAGHDGGTGASP 1081

Query: 355  KVFRDNVGIPIEVAIAAVDDRLREQGNRHKISIIASGGIRNSADVFKSIALGADAVYIGT 414
                 + G+P E+ +A     L + G R++I + A G ++   D+  ++ LGA+   + T
Sbjct: 1082 ISSIRHTGLPWELGLAETHQTLLKNGLRNRIVVQADGQMKTPRDIAIAVLLGAEEWGVAT 1141

Query: 415  AAMVAMGCTVCGRCYTGQCAWGIATQKPELVKRL--EVDDAARRVANLIHAWTHEIQELL 472
            AA+V  GC +  +C+   C  GIATQ   L +R    VDD    V          ++E++
Sbjct: 1142 AALVVEGCIMMRKCHKNTCPVGIATQNKTLRERFAGRVDD----VVTFFQYMAQGLREIM 1197

Query: 473  GAAGINSIESLRGNRDRLR 491
               G  +I  + G   +L+
Sbjct: 1198 AELGFRTINEMVGQAHKLK 1216



 Score = 36.2 bits (82), Expect = 9e-06
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 19/78 (24%)

Query: 77  VWTPEVKQDVVTQAKSGCILLSGMGNAKEYPI------------YFDKIVLDACQVTNPS 124
           V + EV   ++T A++G   L  MG   ++P+            YF ++     QVTNP 
Sbjct: 494 VSSEEVNDIILTLAQTGYEPLGSMG--ADWPVAVLSHQSQHLSNYFKQLF---AQVTNPP 548

Query: 125 IDPLRE--PMELRTYVGK 140
           IDP+RE   M L TY+G+
Sbjct: 549 IDPIRERMVMSLNTYIGR 566